RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TNFAIP6P98066 277 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 HNRNPA0Q13151 305 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 SCGB1D4Q6XE38 83 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NDUFAF7Q7L592 441 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ANKRD13BQ86YJ7 626 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PLD6Q8N2A8 252 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 TMEM116Q8NCL8 245 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RDH12Q96NR8 316 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TXNL4BQ9NX01 149 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 CGGBP1Q9UFW8 167 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF230Q9UIE0 474 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 FAM171A2A8MVW0 826 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PSCAO43653 123 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SRMP19623 302 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TAS2R40P59535 323 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ADPRMQ3LIE5 342 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CALHM3Q86XJ0 350 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR52E1Q8NGJ3 308 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RBPJLQ9UBG7 517 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 MYH1P12882 1939 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR7C2O60412 319 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 AVPI1Q5T686 147 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 LAIR1Q6GTX8 287 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DHRS7BQ6IAN0 325 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 TSSK4Q6SA08 328 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DTX2Q86UW9 622 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FRMD1Q8N878 549 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 LRRC15Q8TF66 581 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF714Q96N38 554 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 GPRIN2O60269 458 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DRD5P21918 477 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF766Q5HY98 468 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLC35F3Q8IY50 421 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR5D13Q8NGL4 314 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PTPMT1Q8WUK0 201 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 HHIPL1Q96JK4 782 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR51J1Q9H342 316 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TXNIPQ9H3M7 391 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PLK3Q9H4B4 646 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZDHHC2Q9UIJ5 367 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ASB4Q9Y574 426 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 AQP7P3A6NL99 342 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RNASE1P07998 156 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 PVRP15151 417 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TGFBR1P36897 503 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 LSAMPQ13449 338 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CEACAM7Q14002 265 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RNFT1Q5M7Z0 435 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NEIL1Q96FI4 390 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 LINC00052Q96N35 136 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLC22A12Q96S37 553 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ASF1BQ9NVP2 202 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 POMT1Q9Y6A1 747 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FAM149AA5PLN7 773 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 HRO43593 1189 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 GATCO43716 136 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 RFPL2O75678 378 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NCR1O76036 304 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NAGAP17050 411 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 IVDP26440 423 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 EPHA8P29322 1005 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 OR2B11Q5JQS5 317 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FAHD2BQ6P2I3 314 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 KRTCAP2Q8N6L1 136 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FAHD2AQ96GK7 314 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 STACQ99469 402 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SUCNR1Q9BXA5 334 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 C9JVG2 144 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 MT-ND4LP03901 98 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OMGP23515 440 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 LIPAP38571 399 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR3A1P47881 315 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 STC1P52823 247 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF705AQ6ZN79 300 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 OR13J1Q8NGT2 312 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF775Q96BV0 537 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 DUS3LQ96G46 650 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 MGLLQ99685 303 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ANKRD10Q9NXR5 420 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 F5H5P2 479 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TNFSF14O43557 240 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CAPNS1P04632 268 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 HOXB5P09067 269 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 HSD3B7Q9H2F3 369 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLCO3A1Q9UIG8 710 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ARHGAP23Q9P227 1491 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 KRASP01116 189 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CCR7P32248 378 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 LKAAEAR1Q8TD35 194 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 RABAC1Q9UI14 185 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR52A1Q9UKL2 312 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MOKQ9UQ07 419 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PAPPAQ13219 1627 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR52A4PA6NMU1 304 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 WNT7AO00755 349 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SMAD7O15105 426 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 EIF4E2O60573 245 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 CNMDO75829 334 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms