RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SUSD2Q9UGT4 822 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 MOKQ9UQ07 419 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 TRAV18A0A075B6X5 111 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 IGF2P01344 180 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 CSN2P05814 226 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 LIPCP11150 499 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 GTF2F2P13984 249 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 ADAM8P78325 824 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 INSM1Q01101 510 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 INPP5JQ15735 1006 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 C4orf46Q504U0 113 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 NHLRC3Q5JS37 347 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 CFAP77Q6ZQR2 320 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 WDFY1Q8IWB7 410 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 DND1Q8IYX4 353 aaKnown RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 OR4C16Q8NGL9 310 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 LIPHQ8WWY8 451 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 FBXL2Q9UKC9 423 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 B9D1Q9UPM9 204 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 KCNMB2Q9Y691 235 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 PRAF2O60831 178 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 RBBP9O75884 186 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 PNPP00491 289 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 ICAM2P13598 275 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 WDR38Q5JTN6 314 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 TMUB2Q71RG4 321 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 COX15Q7KZN9 410 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 TMED4Q7Z7H5 227 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 GPAT4Q86UL3 456 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 STK35Q8TDR2 534 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 HRH3Q9Y5N1 445 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 LOC100509620A0A075B734 347 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 PRSS37A4D1T9 235 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 OR4C45A6NMZ5 311 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 ACOT7O00154 380 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 HOXD4P09016 255 aaPredicted RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 APEHP13798 732 aaKnown RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 ARRB1P49407 418 aaPredicted RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 SORDQ00796 357 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 OR7A5Q15622 319 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 ZNF626Q68DY1 528 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 LINC00346Q8IVM7 164 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 ST8SIA4Q92187 359 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 HAVCR1Q96D42 359 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 APMAPQ9HDC9 416 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 MED29Q9NX70 200 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 CDV3Q9UKY7 258 aaKnown RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 COA3Q9Y2R0 106 aaPredicted RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 RTTNQ86VV8 2226 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 UBE2QL1A1L167 161 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 FADS1O60427 444 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 TXNDC12O95881 172 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 HEXBP07686 556 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 KIR3DL2P43630 455 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 CXCL12P48061 93 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 POLR2HP52434 150 aaKnown RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 RPL27P61353 136 aaKnown RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 SEC61A1P61619 476 aaKnown RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 DCAF7P61962 342 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 SHBQ15464 509 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 CSRP2Q16527 193 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 LRRC37A5PQ49AS3 106 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 BEX5Q5H9J7 111 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 CORO6Q6QEF8 472 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 MUC20Q8N307 709 aaPredicted RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 SPEM1Q8N4L4 309 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 EMC6Q9BV81 110 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 REG4Q9BYZ8 158 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
CTNS-201ENST00000046640 MRPL22Q9NWU5 206 aaKnown RBP11.8□□□□□ -0.52
CTNS-201ENST00000046640 SDK2Q58EX2 2172 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 ARID1AO14497 2285 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 H3BUI4 141 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 EIF1AYO14602 144 aaKnown RBP11.79□□□□□ -0.52
CTNS-201ENST00000046640 RP2O75695 350 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 NDUFB6O95139 128 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 NMBP08949 121 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 IL32P24001 234 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 S100A11P31949 105 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 EIF1AXP47813 144 aaKnown RBP11.79□□□□□ -0.52
CTNS-201ENST00000046640 PNLIPRP2P54317 469 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 FOXK1P85037 733 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 FAM74A1Q5RGS3 127 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 OTOSQ8NHW6 89 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 RADILQ96JH8 1075 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 PPA2Q9H2U2 334 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 CEP192Q8TEP8 1941 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 KIF26BQ2KJY2 2108 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 A8MVM7 634 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 AHSA1O95433 338 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 GIPP09681 153 aaPredicted RBP11.79□□□□□ -0.52
CTNS-201ENST00000046640 RAP2BP61225 183 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 MFGE8Q08431 387 aaPredicted RBP11.79□□□□□ -0.52
CTNS-201ENST00000046640 LCN10Q6JVE6 187 aa11.79□□□□□ -0.52
CTNS-201ENST00000046640 NDUFAF7Q7L592 441 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms