RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Cd83O88324 196 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Creg1O88668 220 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gabrb1P50571 474 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Sf3b6P59708 125 aaKnown RBP20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 CtseP70269 397 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 LvrnQ2KHK3 559 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 InipQ3TXT3 104 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Epha6Q62413 1035 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 IppkQ6P1C1 489 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 SprnQ8BWU1 147 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ttc36Q8VBW8 186 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Pafah2Q8VDG7 390 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Zfp84Q9D654 559 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tex29Q9DA77 186 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 PrnA0A075B668 197 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr560A0A1B0GSU5 314 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Mrap2D3Z1Q2 207 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Trim15G3UY57 292 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Anxa2P07356 339 aaKnown RBP20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Has2P70312 552 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Spc25Q3UA16 226 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ankrd53Q3V0J4 497 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tmub2Q3V209 319 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Zfp975Q6NVD6 525 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc35f2Q7TML3 375 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr1115Q7TR53 326 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr270Q7TS19 314 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 SelenoiQ80TA1 398 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc25a16Q8C0K5 332 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Babam2Q8K3W0 383 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr1043Q8VFK4 314 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr308Q8VFP2 308 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr1497Q8VG11 314 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Sfxn2Q925N2 322 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Bhlhe41Q99PV5 410 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tceal6Q9DB24 200 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 PrndQ9QUG3 179 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Nrg4Q9WTX4 115 aa20.36■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Rasgef1aA0A0N4SVR5 498 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Igkv6-14A0A140T8P1 115 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 CrnnD3YUU6 520 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr544E9PX47 334 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 P01680 129 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Pate2Q3UW31 111 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 SypQ62277 314 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr1286Q7TQY2 305 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr843Q7TRG4 313 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tmem222Q8BVA2 208 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc22a29Q8BWG6 551 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tctn1Q8BZ64 593 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Fbxw19Q8C2W8 466 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ocel1Q8VCR9 219 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 4931417E11RikQ9CR05 305 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 EcdQ9CS74 641 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Aloxe3Q9WV07 711 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Eml6Q5SQM0 1958 aa20.35■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tmem92B7ZWI3 162 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Vmn1r152E9Q9N3 307 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Vmn1r104L7N293 307 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 C3ar1O09047 477 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 P06321 130 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Cfl1P18760 166 aaKnown RBP20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Eif1P48024 113 aaKnown RBP20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Rps25P62852 125 aaKnown RBP20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Doc2bP70169 412 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ccbe1Q3MI99 408 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Cdk10Q3UMM4 360 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr885Q7TRE0 309 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc30a6Q8BJM5 460 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Hus1bQ8K572 276 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gbgt1Q8VI38 347 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Zmynd19Q9CQG3 227 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Mrps28Q9CY16 186 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 MmachcQ9CZD0 279 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Efcab11Q9D0E5 162 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Q9DAE7 121 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tspan32Q9JHH2 256 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Avpr1bQ9WU02 421 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm21854A0A087WNM4 232 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm21936A0A1Y7VJE9 144 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm5788A0A1Y7VK80 144 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm5039J3QNT6 144 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm5724L7N264 670 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gpr52P0C5J4 361 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ccr1l1P51676 356 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tbx5P70326 518 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm2016Q3TQZ4 144 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Plpp5Q3UMZ3 260 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm8332Q3UTA4 144 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Taf6Q62311 678 aaKnown RBP20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tas2r136Q7TQA8 305 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr776Q7TRI3 312 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 P4htmQ8BG58 503 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Pck2Q8BH04 640 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Coro2bQ8BH44 480 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Psmf1Q8BHL8 271 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 NracQ8BNX7 165 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ptges2Q8BWM0 384 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm5662Q8BX20 144 aa20.34■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Lsm14aQ8K2F8 462 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms