RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gm14851Q5ERJ0 116 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Six1Q62231 284 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Plekhm1Q7TSI1 1074 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Pgr15lQ80T54 456 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 QdprQ8BVI4 241 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr868Q8VFI8 309 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Abca15E9PWH4 1668 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Kntc1Q8C3Y4 2207 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rpl3lE9PWZ3 407 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm21863J3KMP8 111 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sh3bp2Q06649 559 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr146Q60884 306 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Nxph2Q61199 261 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 ShhQ62226 437 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 St6gal1Q64685 403 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sidt1Q6AXF6 827 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr314Q7TRZ7 330 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mettl2Q8BMK1 389 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 LdahQ8BVA5 326 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lcn8Q924P3 175 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cadm3Q99N28 396 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc31a2Q9CPU9 143 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Npas3Q9QZQ0 925 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm5141A0A0J9YUW3 581 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm14862B1AV28 81 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp40B1B1D3 796 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 H2-D1P14427 368 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fcer1aP20489 250 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lypd4Q8BVP6 246 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vrk3Q8K3G5 453 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1469Q8VFW5 309 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Papd4Q91YI6 484 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mpped2Q9CZJ0 294 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 SlirpQ9D8T7 112 aaKnown RBP11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1018A2ASV3 311 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 H60cB1B213 197 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 PtgdsO09114 189 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Upk3bQ80YF6 275 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Bhlhe23Q8BGW3 223 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 AplfQ9D842 499 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr895L7N210 316 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1216Q7TR05 311 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr996Q7TRA0 314 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fam221aQ8C790 301 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fbxl22Q8C7B6 236 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 PxnQ8VI36 591 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 B3gat1Q9CW73 334 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tmem37Q9JJV3 211 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Prl3c1Q9QUN5 212 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r180B9EK86 305 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm20518E9Q548 580 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lin7bO88951 207 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 GzmfP08883 248 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sorbs2Q3UTJ2 1180 aaKnown RBP11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tob1Q61471 362 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 MokQ9WVS4 420 aa11.08□□□□□ -0.64
Trim56-201ENSMUST00000054384 Hsd3b2P26149 373 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Srp9P49962 86 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 RidaP52760 135 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr782Q7TRI2 314 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Galnt6Q8C7U7 622 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lysmd4Q8CC84 293 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rnf222Q8CEF8 211 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc35b4Q8CIA5 331 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tmbim7Q9D592 302 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Timm9Q9WV98 89 aaKnown RBP11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm21767J3QPV5 180 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sp1O89090 784 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Hist1h1cP15864 212 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Dusp5Q1HL35 384 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Spryd4Q91WK1 207 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc35b3Q922Q5 369 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mrm1Q99J25 320 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 DohhQ99LN9 302 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vps25Q9CQ80 176 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rnf186Q9D241 226 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm1330D3Z460 184 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 EndogO08600 294 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 VipP32648 170 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tas2r114Q7M722 309 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1412Q8VET3 321 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 B3gnt9Q8VI16 399 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 P2ry12Q9CPV9 347 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Dnajc4Q9D844 244 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm45713A0A1B0GS68 446 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp980A2A9J5 645 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1095A3KPP7 308 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 4930444P10RikD3YUR1 185 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Emp3O35912 163 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 NppaP05125 152 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp13P10754 512 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 GipP48756 144 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc17a1Q61983 465 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slco4a1Q8K078 723 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr509Q8VF20 321 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ntn4Q9JI33 628 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Exo1Q9QZ11 837 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Arfgef1G3X9K3 1846 aaKnown RBP11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm9125P0DMR6 365 aa11.07□□□□□ -0.64
Trim56-201ENSMUST00000054384 Samt2Q497M0 247 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms