RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 A0A1W2PPW3 197 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF593O00488 134 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-221ENST00000641573 SLC22A1O15245 554 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 MAGEB4O15481 346 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-221ENST00000641573 CYTIPO60759 359 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 SYNGR4O95473 234 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 CLDN1O95832 211 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 PDGFAP04085 211 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 CSNK1A1P48729 337 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 ENTPD1P49961 510 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 VBP1P61758 197 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 NCS1P62166 190 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 SPCS2Q15005 226 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 HIST3H3Q16695 136 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 TIMM50Q3ZCQ8 353 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 OTPQ5XKR4 325 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 VASH1Q7L8A9 365 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-221ENST00000641573 GLB1L2Q8IW92 636 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 FNDC8Q8TC99 324 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 TMEM54Q969K7 222 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 MCHR2Q969V1 340 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 OR2M2Q96R28 347 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 CHCHD6Q9BRQ6 235 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 DCUN1D5Q9BTE7 237 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 TRIM36Q9NQ86 728 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 PAQR5Q9NXK6 330 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-221ENST00000641573 LAMP5Q9UJQ1 280 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 STUB1Q9UNE7 303 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 ESPL1Q14674 2120 aa11.62□□□□□ -0.55
PHGDH-221ENST00000641573 MED12Q93074 2177 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 LOC100506127A0A0U1RQW1 187 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 PRR32B1ATL7 298 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 E9PI62 339 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 PHYHO14832 338 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 GPX5O75715 221 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF432O94892 652 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 MPZL1O95297 269 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 IGHG3P01860 377 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 QDPRP09417 244 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 SPARCP09486 303 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 GAAP10253 952 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 PSKH1P11801 424 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 NR2C1P13056 603 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF823P16415 610 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 ALOX5APP20292 161 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 PSMA1P25786 263 aaKnown RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 RPS27P42677 84 aaKnown RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 TAS2R43P59537 309 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 RPS25P62851 125 aaKnown RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 ADAM8P78325 824 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 C3AR1Q16581 482 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 MEP1BQ16820 701 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 EIF2S3LQ2VIR3 472 aaKnown RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 PLEKHG7Q6ZR37 379 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 Q6ZS92 163 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 DPY19L4Q7Z388 723 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 TMEM123Q8N131 208 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 SLC26A10Q8NG04 563 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 OR6N1Q8NGY5 312 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 OTOSQ8NHW6 89 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 NDNFQ8TB73 568 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 THEM6Q8WUY1 208 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 PNPLA2Q96AD5 504 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 INTS12Q96CB8 462 aaKnown RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 WDYHV1Q96HA8 205 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 TSC22D3Q99576 134 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 GLTPQ9NZD2 209 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 KLHL9Q9P2J3 617 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 KCNG2Q9UJ96 466 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 GNG8Q9UK08 70 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 MCTS1Q9ULC4 181 aaKnown RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 FLVCR1Q9Y5Y0 555 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 SIRT4Q9Y6E7 314 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-221ENST00000641573 TMEM14AQ9Y6G1 99 aa11.61□□□□□ -0.55
PHGDH-221ENST00000641573 A0A1W2PPL8 197 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 METTL15A6NJ78 407 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 LRRTM2O43300 516 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 HRGP04196 525 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 CPN1P15169 458 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 CELP19835 753 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 LAP3P28838 519 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 TGFBR1P36897 503 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 CRYBB2P43320 205 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 SELENOPP49908 381 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 GBX2P52951 348 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 EGR3Q06889 387 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 GPR50Q13585 617 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 TEX30Q5JUR7 227 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 PHYHD1Q5SRE7 291 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF684Q5T5D7 378 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 SLC18B1Q6NT16 456 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 LRFN4Q6PJG9 635 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 CHMP1BQ7LBR1 199 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 AAED1Q7RTV5 226 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms