RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 GNAO1P09471 354 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 PPP3CBP16298 524 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 MYL12AP19105 171 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 PAX7P23759 505 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 NAA10P41227 235 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-218ENST00000641491 ENTPD1P49961 510 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 MRPS34P82930 218 aaKnown RBP11.4□□□□□ -0.58
PHGDH-218ENST00000641491 ADORA2A-AS1P86434 159 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 SCRN3Q0VDG4 424 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 HIST3H3Q16695 136 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 NRN1LQ496H8 165 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 SFRP5Q5T4F7 317 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 SLC25A47Q6Q0C1 308 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 ZBTB46Q86UZ6 589 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 STX19Q8N4C7 294 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 SLC22A24Q8N4F4 322 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF540Q8NDQ6 660 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 BBS1Q8NFJ9 593 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 OR51G2Q8NGK0 314 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 OR1K1Q8NGR3 316 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 RHOXF1Q8NHV9 184 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 RNASE6Q93091 150 aaKnown RBP11.4□□□□□ -0.58
PHGDH-218ENST00000641491 MNTQ99583 582 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 WACQ9BTA9 647 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 MED18Q9BUE0 208 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 NGBQ9NPG2 151 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 TMEM38BQ9NVV0 291 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 ZNF226Q9NYT6 803 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 LAMP5Q9UJQ1 280 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
PHGDH-218ENST00000641491 IGLV1-36A0A0B4J1U3 117 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 IQCMA0A1B0GVH7 501 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 NKX2-6A6NCS4 301 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF670-ZNF695F2Z2N8 137 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 CASKO14936 926 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 DENRO43583 198 aaKnown RBP11.39□□□□□ -0.59
PHGDH-218ENST00000641491 CGAP01215 116 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 PTHP01270 115 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 HRGP04196 525 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 CLUP10909 449 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-218ENST00000641491 IGHV1-2P23083 117 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 CDAP32320 146 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 ARR3P36575 388 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 NUDT6P53370 316 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 LSM6P62312 80 aaKnown RBP11.39□□□□□ -0.59
PHGDH-218ENST00000641491 AQP6Q13520 282 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 PHYHD1Q5SRE7 291 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 SLC25A30Q5SVS4 291 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 SLC18B1Q6NT16 456 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 LRFN4Q6PJG9 635 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 NHLRC1Q6VVB1 395 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF433Q8N7K0 673 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-218ENST00000641491 RELL2Q8NC24 303 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-218ENST00000641491 OR10H4Q8NGA5 316 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 C11orf40Q8WZ69 217 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 MYDGFQ969H8 173 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 TEAD3Q99594 435 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 NMNAT2Q9BZQ4 307 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 ACTR6Q9GZN1 396 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 OBP2BQ9NPH6 170 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 POLE4Q9NR33 117 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 LRCH1Q9Y2L9 728 aa11.39□□□□□ -0.59
PHGDH-218ENST00000641491 SPENQ96T58 3664 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ITGA5P08648 1049 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 CST2P09228 141 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 DBTP11182 482 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 PSMB1P20618 241 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 COX5AP20674 150 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 NTF4P34130 210 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ISL1P61371 349 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF91Q05481 1191 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 RAB40BQ12829 278 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 EIF2B1Q14232 305 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ETFDHQ16134 617 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 TBRG1Q3YBR2 411 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 C1QTNF12Q5T7M4 302 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 AADACL4Q5VUY2 407 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 KCTD18Q6PI47 426 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF474Q6S9Z5 364 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 USP51Q70EK9 711 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 SLC16A9Q7RTY1 509 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 BCDIN3DQ7Z5W3 292 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 SLC35F2Q8IXU6 374 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 GABRG1Q8N1C3 465 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 HSD17B8Q92506 261 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 PTP4A1Q93096 173 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 CCDC90BQ9GZT6 254 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms