RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SVBPQ8N300 66 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 CSNK1A1LQ8N752 337 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 BOLLQ8N9W6 283 aaKnown RBP12.36□□□□□ -0.43
PAX6-280ENST00000640872 PLPP7Q8NBV4 271 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 PPP1R1CQ8WVI7 109 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 LMF1Q96S06 567 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 PDCD10Q9BUL8 212 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 PTDSS2Q9BVG9 487 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 SLC7A5P2Q9GIP4 190 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 Q9N2J8 555 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 KCNG2Q9UJ96 466 aa12.36□□□□□ -0.43
PAX6-280ENST00000640872 NOP16Q9Y3C1 178 aaKnown RBP12.36□□□□□ -0.43
PAX6-280ENST00000640872 A6NCN8 305 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 POM121BA6NF01 834 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 TMEM200CA6NKL6 621 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 PHYHO14832 338 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 SLC31A1O15431 190 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 RPL35P42766 123 aaKnown RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 EGR4Q05215 589 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 RPL18Q07020 188 aaKnown RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 SRSF5Q13243 272 aaKnown RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 GUCA2BQ16661 112 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 WBP2NLQ6ICG8 309 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 BCORP1Q8N888 145 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 OTOSQ8NHW6 89 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 SEC22AQ96IW7 307 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ATPIF1Q9UII2 106 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ZNF107Q9UII5 783 aaPredicted RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 LAMA1P25391 3075 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 OR14I1A6ND48 311 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 FGF16O43320 207 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 HLA-AP01891 365 aaKnown RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 POU2F2P09086 479 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 PNMTP11086 282 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ZBTB25P24278 435 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ACTR1BP42025 376 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 CAPZA1P52907 286 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ACTR1AP61163 376 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 GPR18Q14330 331 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ATXN7L3Q14CW9 347 aaPredicted RBP12.35□□□□□ -0.43
PAX6-280ENST00000640872 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 RD3Q7Z3Z2 195 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ZNF440Q8IYI8 595 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 BPIFB2Q8N4F0 458 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ZBTB8AQ96BR9 441 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 OR8B4Q96RC9 309 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 STARD5Q9NSY2 213 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ASF1BQ9NVP2 202 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 GDE1Q9NZC3 331 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 MLXQ9UH92 298 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 MSRAQ9UJ68 235 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 KLK13Q9UKR3 277 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ATG2AQ2TAZ0 1938 aa12.35□□□□□ -0.43
PAX6-280ENST00000640872 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 LINC01565O15544 149 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 OIP5O43482 229 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 CYB5AP00167 134 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 CD37P11049 281 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 KLHL26Q53HC5 615 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 C10orf91Q5T1B1 145 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 ZNF776Q68DI1 518 aaPredicted RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 TMEM225Q6GV28 225 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 HAGHLQ6PII5 290 aaPredicted RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 TMEM184AQ6ZMB5 413 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 ZNF813Q6ZN06 617 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 RAB11FIP2Q7L804 512 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 LILRB1Q8NHL6 650 aaPredicted RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 FAM131CQ96AQ9 280 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 SYT4Q9H2B2 425 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 SLC22A13Q9Y226 551 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 DOCK8Q8NF50 2099 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 RAD1O60671 282 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 PNPP00491 289 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 RENP00797 406 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 IL2RAP01589 272 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 ZNF28P17035 718 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 HTR2CP28335 458 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 AKR1D1P51857 326 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 DCDP81605 110 aaKnown RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 SERTAD2Q14140 314 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 INPP5JQ15735 1006 aaPredicted RBP12.34□□□□□ -0.43
PAX6-280ENST00000640872 MICBQ29980 383 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 LYG2Q86SG7 212 aa12.34□□□□□ -0.43
PAX6-280ENST00000640872 FAM174AQ8TBP5 190 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms