RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 CEBPEQ15744 281 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM41BQ5BJD5 291 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FAM57BQ71RH2 274 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 COMTD1Q86VU5 262 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SHISA5Q8N114 240 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 D2HGDHQ8N465 521 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DMBX1Q8NFW5 382 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 OR51T1Q8NGJ9 327 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 HTRA1Q92743 480 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CMSS1Q9BQ75 279 aaKnown RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF649Q9BS31 505 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF416Q9BWM5 594 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 PPA2Q9H2U2 334 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 APMAPQ9HDC9 416 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 MAN2C1Q9NTJ4 1040 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TRGV10A0A0A0MS01 117 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 LOC100289279A0A1B0GTE1 492 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 IGLV3-27P01718 113 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 RAB3AP20336 220 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SEC61A1P61619 476 aaKnown RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 GRB2P62993 217 aaKnown RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SLC10A2Q12908 348 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DUSP8Q13202 625 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF628Q5EBL2 1059 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 C1orf140Q5VVS0 124 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SLC35D2Q76EJ3 337 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ANKRD37Q7Z713 158 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 NAA40Q86UY6 237 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM104Q8NE00 496 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FBXO27Q8NI29 283 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF420Q8TAQ5 688 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 HSD17B8Q92506 261 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 MARVELD3Q96A59 401 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CNTNAP3Q9BZ76 1288 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 OR11A1Q9GZK7 315 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SLC2A8Q9NY64 477 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DEGS1O15121 323 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 GNB1P62873 340 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ERVK-25P63136 954 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FXNQ16595 210 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ALKBH6Q3KRA9 238 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ANKDD1AQ495B1 522 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TECRLQ5HYJ1 363 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 MUC20Q8N307 709 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 OXGR1Q96P68 337 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DCTN5Q9BTE1 182 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DNAJB9Q9UBS3 223 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 IL17BQ9UHF5 180 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 RBMX2Q9Y388 322 aaKnown RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 COL5A3P25940 1745 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TRIM77I1YAP6 450 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 GMDSO60547 372 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ADAM11O75078 769 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TOX4O94842 621 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 AKR7A3O95154 331 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TK1P04183 234 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 MRPL3P09001 348 aaKnown RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CD1EP15812 388 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FUT4P22083 530 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 PCSK6P29122 969 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DRD3P35462 400 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DDOSTP39656 456 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 RTL8BQ17RB0 113 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF468Q5VIY5 522 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DCAF12L2Q5VW00 463 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 NUFIP2Q7Z417 695 aaKnown RBP4.57□□□□□ -1.68
SCN1A-218ENST00000640036 MUC15Q8N387 334 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 GALNT11Q8NCW6 608 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FDCSPQ8NFU4 85 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 OR6T1Q8NGN1 323 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 OR5K1Q8NHB7 308 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CD300LFQ8TDQ1 290 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FCAMRQ8WWV6 532 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ASB17Q8WXJ9 295 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 RSPRY1Q96DX4 576 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 STACQ99469 402 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM59Q9BXS4 323 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SLC17A7Q9P2U7 560 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SEC14L6B5MCN3 397 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 E9PI62 339 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 PRKYO43930 277 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 WISP1O95388 367 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 TGFAP01135 160 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 QDPRP09417 244 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A6P0DMU7 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A5P0DMU8 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A7P0DMV0 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A8P0DMV1 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A9P0DMV2 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 FGF5P12034 268 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 DSCR9P59020 149 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 RAB11AP62491 216 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CLEC12BQ2HXU8 276 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 SCGB2B2Q4G0G5 96 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A2Q5DJT8 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 CT45A1Q5HYN5 189 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF529Q6P280 563 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 PDZD9Q8IXQ8 264 aa4.57□□□□□ -1.68
SCN1A-218ENST00000640036 OR4Q3Q8NH05 313 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms