RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CAMK2AQ9UQM7 478 aa13.61□□□□□ -0.23
CLN6-219ENST00000637329 IGKV1D-43A0A0B4J1Z2 117 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 ERVH48-1M5A8F1 160 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 TMCC2O75069 709 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 KRT8P05787 483 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 QDPRP09417 244 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 TACSTD2P09758 323 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 GALP22466 123 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 GADD45AP24522 165 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 SELENOPP49908 381 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 GBX2P52951 348 aaPredicted RBP13.6□□□□□ -0.23
CLN6-219ENST00000637329 ROM1Q03395 351 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 TRAM1Q15629 374 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 ETFDHQ16134 617 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 LIPKQ5VXJ0 399 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 CARD17Q5XLA6 110 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 KCTD18Q6PI47 426 aaPredicted RBP13.6□□□□□ -0.23
CLN6-219ENST00000637329 AAED1Q7RTV5 226 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 ADGRE4PQ86SQ3 457 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 FNDC9Q8TBE3 224 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 PRRG4Q9BZD6 226 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 ULBP2Q9BZM5 246 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 PARPBPQ9NWS1 579 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 TP53TG5Q9Y2B4 290 aa13.6□□□□□ -0.23
CLN6-219ENST00000637329 HECTD1Q9ULT8 2610 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 A0A1W2PPL8 197 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 METTL15A6NJ78 407 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 SLC22A20A6NK97 555 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 J3QLW9 94 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 ZNF593O00488 134 aaPredicted RBP13.59□□□□□ -0.23
CLN6-219ENST00000637329 LALBAP00709 142 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 CD1AP06126 327 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 SPARCP09486 303 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 ZNF19P17023 458 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 TGM4P49221 684 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 ZNF84P51523 738 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 OR12D2P58182 307 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 MCEMP1Q8IX19 187 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 KBTBD8Q8NFY9 601 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 OR52N5Q8NH56 324 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 NSMAFQ92636 917 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 EXTL1Q92935 676 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 PELI1Q96FA3 418 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 GLRX2Q9NS18 164 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 GNG8Q9UK08 70 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 KLHDC2Q9Y2U9 406 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 NOSIPQ9Y314 301 aaKnown RBP13.59□□□□□ -0.23
CLN6-219ENST00000637329 UGT2A1Q9Y4X1 527 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 CFAP46Q8IYW2 2715 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 SPTA1P02549 2419 aa13.59□□□□□ -0.23
CLN6-219ENST00000637329 DHHO43323 396 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 PLPP2O43688 288 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 ATE1O95260 518 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 ABHD16AO95870 558 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 GPANK1O95872 356 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.24
CLN6-219ENST00000637329 HCCSP53701 268 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 LSM6P62312 80 aaKnown RBP13.58□□□□□ -0.24
CLN6-219ENST00000637329 CXADRP78310 365 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 NFATC3Q12968 1075 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 CDK5R1Q15078 307 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 SF3B4Q15427 424 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLN6-219ENST00000637329 C3AR1Q16581 482 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 TP53I3Q53FA7 332 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 RPL22L1Q6P5R6 122 aaKnown RBP13.58□□□□□ -0.24
CLN6-219ENST00000637329 LRFN4Q6PJG9 635 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 CD200R1LQ6Q8B3 271 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 DEGS2Q6QHC5 323 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 FAM180AQ6UWF9 173 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 GPR137CQ8N3F9 429 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 CPT1CQ8TCG5 803 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 RPS4Y2Q8TD47 263 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 SMAP2Q8WU79 429 aaPredicted RBP13.58□□□□□ -0.24
CLN6-219ENST00000637329 C11orf40Q8WZ69 217 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 WBP1Q96G27 269 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 OR8B4Q96RC9 309 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 NELFAQ9H3P2 528 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 POLE4Q9NR33 117 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 ACOXLQ9NUZ1 547 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 CLCF1Q9UBD9 225 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 FREM3P0C091 2139 aa13.58□□□□□ -0.24
CLN6-219ENST00000637329 CNTRLQ7Z7A1 2325 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 B8ZZF3 427 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 K7EM74 188 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 ZNF254O75437 659 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 HLA-DPB1P04440 258 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 YES1P07947 543 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 PSKH1P11801 424 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 CELP19835 753 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 MSR1P21757 451 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 SIRPAP78324 504 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 MRPS34P82930 218 aaKnown RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 AQP6Q13520 282 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 EIF2B1Q14232 305 aaKnown RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 MEP1BQ16820 701 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 NRN1LQ496H8 165 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 DMKNQ6E0U4 476 aaPredicted RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 USP43Q70EL4 1123 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms