RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 C3orf30Q96M34 536 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 CCR6P51684 374 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC35F3Q8IY50 421 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM235A6NFC5 223 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 SH2D1BO14796 132 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 B4GALT3O60512 393 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 RD3LP0DJH9 198 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 KCNJ8Q15842 424 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 DTWD2Q8NBA8 298 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 LRRC15Q8TF66 581 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 SFT2D1Q8WV19 159 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 TRAPPC4Q9Y296 219 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 COL1A1P02452 1464 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 OR13J1Q8NGT2 312 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 EAF1Q96JC9 268 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 ARPC5LQ9BPX5 153 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 ZFP57Q9NU63 452 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 OR2M5A3KFT3 312 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 C7P10643 843 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 HBG1P69891 147 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 HBG2P69892 147 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 RPS19BP1Q86WX3 136 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 ENTHD1Q8IYW4 607 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 TAS2R4Q9NYW5 299 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 DBX1A6NMT0 343 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 C21orf33P30042 268 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 B3GNT8Q7Z7M8 397 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 BLNKQ8WV28 456 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 PLA2G12AQ9BZM1 189 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 OR52A1Q9UKL2 312 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 GATCO43716 136 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 RACK1P63244 317 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 L3HYPDHQ96EM0 354 aa16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF300Q96RE9 604 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 METTL17Q9H7H0 456 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 A0A087WV62 115 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM82A0PJX8 343 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 M0QZQ0 153 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 CRYAAP02489 173 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 RNASE1P07998 156 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 HOXD12P35452 270 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 GPM6AP51674 278 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 C19orf57Q0VDD7 668 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 EXT1Q16394 746 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 NAXDQ8IW45 347 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 CISD2Q8N5K1 135 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 TSLPQ969D9 159 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 SPINK4O60575 86 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF623O75123 536 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM41BQ5BJD5 291 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 ASB17Q8WXJ9 295 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 SPRY1O43609 319 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 TLE4Q04727 773 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 CDC20BQ86Y33 519 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 OR56B1Q8NGI3 324 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 KHSRPQ92945 711 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC35A4Q96G79 324 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC35D1Q9NTN3 355 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 LOC285095A0A1B0GVY8 99 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 UNCXA6NJT0 531 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 BTN1A1Q13410 526 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 RAB35Q15286 201 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM123Q8N131 208 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 STACQ99469 402 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM221A6NGB7 291 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 PSMB3P49720 205 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 PLAG1Q6DJT9 500 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 ACSM6Q6P461 480 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 GPR78Q96P69 363 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 HSD3B7Q9H2F3 369 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 C1GALT1Q9NS00 363 aa16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC22A20A6NK97 555 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC30A7Q8NEW0 376 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 CXCL13O43927 109 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 ICOSLGO75144 302 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 CCL2P13500 99 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 RPS27P42677 84 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 ACSM1Q08AH1 577 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM202A6NGA9 273 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 CYTIPO60759 359 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 OPRM1P35372 400 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 OR4F5Q8NH21 305 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 NUDT8Q8WV74 236 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 SDCBPO00560 298 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 RFPL3O75679 317 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 SNCGO76070 127 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 NDFIP1Q9BT67 221 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 SOX7Q9BT81 388 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 LHX3Q9UBR4 397 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 SEZ6L2Q6UXD5 910 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 CNTN4Q8IWV2 1026 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 OR2T6Q8NHC8 308 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 NANPQ8TBE9 248 aa16.34■□□□□ 0.21
CACNA1A-227ENST00000636549 SNX11Q9Y5W9 270 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms