RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ADPRHP54922 357 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 SLC17A1Q14916 467 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 TCEA2Q15560 299 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 TSC22D1Q15714 1073 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 PHF19Q5T6S3 580 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 TMEM225Q6GV28 225 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 H3F3CQ6NXT2 135 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 PAPD4Q6PIY7 484 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ADGRE4PQ86SQ3 457 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ZFP57Q9NU63 452 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 FARSAQ9Y285 508 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 OR10H1Q9Y4A9 318 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 F8VVB4 439 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 F8VWA3 439 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 FADS1O60427 444 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 ALOX12BO75342 701 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 F13BP05160 661 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 HEXAP06865 529 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 CD37P11049 281 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 ADCYAP1P18509 176 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 MESTQ5EB52 335 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 RNASE10Q5GAN6 216 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 TMEM184AQ6ZMB5 413 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 OR5AP2Q8NGF4 316 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 FAM3CQ92520 227 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 PTX4Q96A99 478 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 PIK3IP1Q96FE7 263 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 MOGAT1Q96PD6 335 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 LPAR4Q99677 370 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 SLC6A7Q99884 636 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 SEC11CQ9BY50 192 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF768Q9H5H4 540 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 ESRP2Q9H6T0 727 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 ELOVL3Q9HB03 270 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 LRIT1Q9P2V4 623 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 H3BSH0 61 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 CCSO14618 274 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 FOXS1O43638 330 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 KAT7O95251 611 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 POU2F2P09086 479 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 CD79AP11912 226 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 FSTP19883 344 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 PMPCAQ10713 525 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 KCNAB1Q14722 419 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 PNLIPRP3Q17RR3 467 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 AVPI1Q5T686 147 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 PSRC1Q6PGN9 363 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 NPSR1Q6W5P4 371 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 SKA3Q8IX90 412 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF679Q8IYX0 411 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 PLPP7Q8NBV4 271 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 SLC30A7Q8NEW0 376 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 OR4C3Q8NH37 302 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 OR10G6Q8NH81 332 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 RNF128Q8TEB7 428 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 GLYATL2Q8WU03 294 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 FOXRED1Q96CU9 486 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 CDC6Q99741 560 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 DPP7Q9UHL4 492 aa13.37□□□□□ -0.27
CACNA1A-220ENST00000635988 NUP210LQ5VU65 1888 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 C9orf170A2RU37 121 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF208O43345 1280 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 WASP42768 502 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 PPICP45877 212 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CXADRP78310 365 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 IL13RA1P78552 427 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 RPL18Q07020 188 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 FAM78AQ5JUQ0 283 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 TEX30Q5JUR7 227 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 IL34Q6ZMJ4 242 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CBLN2Q8IUK8 224 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CSNK1A1LQ8N752 337 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 BAHD1Q8TBE0 780 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 OIT3Q8WWZ8 545 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 TSPAN32Q96QS1 320 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 PTDSS2Q9BVG9 487 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 SEMA6CQ9H3T2 930 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 MMP26Q9NRE1 261 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 VSIG4Q9Y279 399 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 TEX13DA0A0J9YY54 714 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 A0A1W2PPC1 479 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF28P17035 718 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CENPAP49450 140 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 PGDP52209 483 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CYCSP99999 105 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 MEP1BQ16820 701 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 TMEM71Q6P5X7 295 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 BAP18Q8IXM2 172 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 SHISA5Q8N114 240 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 BCORP1Q8N888 145 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 DMBX1Q8NFW5 382 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms