RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SAMD12Q8N8I0 201 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 DTWD2Q8NBA8 298 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR52L2PQ8NGH6 319 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR2AE1Q8NHA4 323 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ARRDC2Q8TBH0 407 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SPPL2BQ8TCT7 592 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR8D1Q8WZ84 308 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 VWCEQ96DN2 955 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MRAP2Q96G30 205 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ZC3HAV1LQ96H79 300 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TSSK3Q96PN8 268 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR2V2Q96R30 315 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 LMF2Q9BU23 707 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SNHG12Q9BXW3 62 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF350Q9GZX5 532 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CPVLQ9H3G5 476 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CST9LQ9H4G1 147 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 INPP5EQ9NRR6 644 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 HHLA2Q9UM44 414 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CNTN6Q9UQ52 1028 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ANKRD31Q8N7Z5 1873 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 hCG_38984A0A1B0GV85 526 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TCRBV5S2A0A599 114 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NPEPPSL1A6NEC2 478 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 HIDE1A8MVS5 230 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 C9orf172C9J069 976 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 HAS3O00219 553 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 WNT9AO14904 365 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 BCAT2O15382 392 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 B4GALT3O60512 393 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ICOSLGO75144 302 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 DKK1O94907 266 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NKX2-2O95096 273 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 S1PR4O95977 384 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ST6GAL1P15907 406 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 BMP5P22003 454 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 FABP6P51161 128 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 FPGSQ05932 587 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TPBGQ13641 420 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NR0B2Q15466 257 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PPM1JQ5JR12 505 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 DNLZQ5SXM8 178 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ABHD17BQ5VST6 288 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ALKAL2Q6UX46 152 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4D9Q8NGE8 314 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR6T1Q8NGN1 323 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR9G4Q8NGQ1 327 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NUBPLQ8TB37 319 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MARCH1Q8TCQ1 289 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 LRRC58Q96CX6 371 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 COPS8Q99627 209 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 FAAP24Q9BTP7 215 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NELFAQ9H3P2 528 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SMOC2Q9H3U7 446 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ZDHHC8Q9ULC8 765 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 LAMA1P25391 3075 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF469Q96JG9 3925 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR5H15A6NDH6 313 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR5H1A6NKK0 313 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 C3orf70A6NLC5 250 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PLPP1O14494 284 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 DSCR3O14972 297 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ANKRD28O15084 1053 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 YIF1AO95070 293 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 FGF19O95750 216 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ESR1P03372 595 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ACRP10323 421 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MMP9P14780 707 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 GADD45AP24522 165 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PRDX2P32119 198 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 GLUD2P49448 558 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ATP1B3P54709 279 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CLDN18P56856 261 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 UBE2MP61081 183 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 BTG1P62324 171 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PAX5Q02548 391 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 GPR18Q14330 331 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TTLL4Q14679 1199 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SNRNP35Q16560 246 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PYY3Q5JQD4 70 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ADNP2Q6IQ32 1131 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM71F2Q6NXP2 309 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TBPL2Q6SJ96 375 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CLEC14AQ86T13 490 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ACOT1Q86TX2 421 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NIT1Q86X76 327 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 IZUMO1Q8IYV9 350 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4K15Q8NH41 348 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SORCS1Q8WY21 1168 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 NEIL1Q96FI4 390 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CXorf58Q96LI9 332 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MRPL57Q9BQC6 102 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 DUSP16Q9BY84 665 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ARL6Q9H0F7 186 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 HHATLQ9HCP6 504 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SEMA4GQ9NTN9 838 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF629Q9UEG4 869 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TRMT112Q9UI30 125 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms