RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-262	ENST00000628078	RIMS3	Q9UJD0	308 aa		11.45	□□□□□ -0.58
TCF4-262	ENST00000628078	PLSCR5	A0PG75	271 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	FUT4	P22083	530 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	ZFP36	P26651	326 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	LAP3	P28838	519 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	PCGF2	P35227	344 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	GDI2	P50395	445 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	GZMM	P51124	257 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	MMP15	P51511	669 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	MOG	Q16653	247 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	VMAC	Q2NL98	169 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	AWAT1	Q58HT5	328 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	RABL3	Q5HYI8	236 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	ARMC4	Q5T2S8	1044 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	AGBL2	Q5U5Z8	902 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	OTP	Q5XKR4	325 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	RFPL4B	Q6ZWI9	263 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	KLF14	Q8TD94	323 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	NABP1	Q96AH0	204 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	ELMOD3	Q96FG2	381 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	RBM4	Q9BWF3	364 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	SUCNR1	Q9BXA5	334 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	RABEP2	Q9H5N1	569 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	MMP26	Q9NRE1	261 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078	PCDHGB1	Q9Y5G3	927 aa		11.44	□□□□□ -0.58
TCF4-262	ENST00000628078		A0A1W2PPL8	197 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	FBP2	O00757	339 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	UBOX5	O94941	541 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	PRSS23	O95084	383 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	YAP1	P46937	504 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	COMP	P49747	757 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	DAP3	P51398	398 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	ARFIP2	P53365	341 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	PPP1CB	P62140	327 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	MRPS34	P82930	218 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	TTMP	Q5BVD1	217 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	NANOGP8	Q6NSW7	305 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	ZNF774	Q6NX45	483 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	SLC25A47	Q6Q0C1	308 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	DPPA2	Q7Z7J5	298 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	BCL6B	Q8N143	479 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	DPP10	Q8N608	796 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	SIGLECL1	Q8N7X8	197 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	TMEM239	Q8WW34	195 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	JMJD8	Q96S16	334 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	SLC19A3	Q9BZV2	496 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	WNT5B	Q9H1J7	359 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	POFUT1	Q9H488	388 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	NPHS2	Q9NP85	383 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	EGFL7	Q9UHF1	273 aa		11.43	□□□□□ -0.58
TCF4-262	ENST00000628078	SCG5	P05408	212 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	SEC61A1	P61619	476 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	UBA52	P62987	128 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	C10orf128	Q5T292	105 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	INTS11	Q5TA45	600 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	USP43	Q70EL4	1123 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	JAZF1	Q86VZ6	243 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	OR51A7	Q8NH64	312 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	ST7L	Q8TDW4	575 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	NMD3	Q96D46	503 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	TPD52L3	Q96J77	140 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	ATP6V1G3	Q96LB4	118 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	SEPHS2	Q99611	448 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	OR2H1	Q9GZK4	316 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	PCDHAC1	Q9H158	963 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	DDX28	Q9NUL7	540 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	RHCG	Q9UBD6	479 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	MED31	Q9Y3C7	131 aa		11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	SOX21	Q9Y651	276 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-262	ENST00000628078	IGHV3OR16-10	A0A075B7F0	116 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078		A0A0G2JND7	137 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TRAPPC2L	H3BP13	241 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078		H7C1C5	153 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078		J3QLI3	93 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TIMM8A	O60220	97 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	IFI30	P13284	250 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	FPR2	P25090	351 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	ZNF133	P52736	654 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	CTXN1	P60606	82 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	LCN6	P62502	163 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TNFAIP6	P98066	277 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TAF11	Q15544	211 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	MMEL1	Q495T6	779 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	NRN1L	Q496H8	165 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	ALG10	Q5BKT4	473 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	CCDC80	Q76M96	950 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TREML1	Q86YW5	311 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	SLC30A8	Q8IWU4	369 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	SGMS2	Q8NHU3	365 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	C4orf45	Q96LM5	186 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	RBP7	Q96R05	134 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	ECSIT	Q9BQ95	431 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	EGLN1	Q9GZT9	426 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TXNIP	Q9H3M7	391 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	EMC7	Q9NPA0	242 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	INTS9	Q9NV88	658 aa	Known RBP	11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	ZNF69	Q9UC07	566 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	KLHL21	Q9UJP4	597 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TANC2	Q9HCD6	1990 aa		11.41	□□□□□ -0.58
TCF4-262	ENST00000628078	TRAV27	A0A087WT01	109 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms