RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 PCBD1P61457 104 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 RAB1AP62820 205 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 MRPS34P82930 218 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CCNIQ14094 377 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 KPNB1Q14974 876 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 TBC1D28Q2M2D7 210 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF672Q499Z4 452 aaPredicted RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 MESTQ5EB52 335 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 LRFN4Q6PJG9 635 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 RASSF6Q6ZTQ3 369 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ASRGL1Q7L266 308 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 FAM122BQ7Z309 247 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 WDFY1Q8IWB7 410 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 SKA3Q8IX90 412 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ICA1LQ8NDH6 482 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 SDR9C7Q8NEX9 313 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 OR2T33Q8NG76 320 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 OR10H5Q8NGA6 315 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 OR52E2Q8NGJ4 325 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 OR4K13Q8NH42 304 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 PIGTQ969N2 578 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 PLEKHA8Q96JA3 519 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 DMRTB1Q96MA1 342 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 FOXN4Q96NZ1 517 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 SMG1Q96Q15 3661 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 GPX7Q96SL4 187 aaPredicted RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 NMNAT3Q96T66 252 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 GPA33Q99795 319 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 TSSK6Q9BXA6 273 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 MRPL13Q9BYD1 178 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 NELFAQ9H3P2 528 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 LIME1Q9H400 295 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CXorf56Q9H5V9 222 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 PLEKHF2Q9H8W4 249 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 NRIP3Q9NQ35 241 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 RPRD1BQ9NQG5 326 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ARMC1Q9NVT9 282 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CISD1Q9NZ45 108 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 BAIAP2Q9UQB8 552 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 SPTBN1Q01082 2364 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 IMPA2O14732 288 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 IDH3BO43837 385 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 MGRN1O60291 552 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PTP4A3O75365 173 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 CELA3BP08861 270 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PATE4P0C8F1 98 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 HIST1H1CP16403 213 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF26P17031 533 aaPredicted RBP6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PRKACGP22612 351 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 CCNOP22674 350 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 LAP3P28838 519 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 FXYD6P3P58550 94 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NAAAQ02083 359 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 GLO1Q04760 184 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SCRN3Q0VDG4 424 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 COX10Q12887 443 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SNTB2Q13425 540 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 FHL1Q13642 323 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 RAB39AQ14964 217 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 ATP6AP1Q15904 470 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 HIST3H3Q16695 136 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 C3orf36Q3SXR2 165 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SLC36A3Q495N2 470 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NRN1LQ496H8 165 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 C10orf128Q5T292 105 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 AGAP6Q5VW22 663 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 ZFP1Q6P2D0 407 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SHQ1Q6PI26 577 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SLC25A47Q6Q0C1 308 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SEZ6L2Q6UXD5 910 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NHLRC1Q6VVB1 395 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 AMIGO2Q86SJ2 522 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 HIPK1Q86Z02 1210 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 GLB1L2Q8IW92 636 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 HS3ST5Q8IZT8 346 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF611Q8N823 705 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PAPD5Q8NDF8 572 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PROKR2Q8NFJ6 384 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 IL17RDQ8NFM7 739 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 OR1J2Q8NGS2 313 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 OR2T4Q8NH00 348 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 OR5K1Q8NHB7 308 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SMAP2Q8WU79 429 aaPredicted RBP6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PYDC1Q8WXC3 89 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 DNAJC9Q8WXX5 260 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NEUROG1Q92886 237 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NINJ1Q92982 152 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 SLCO4A1Q96BD0 722 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PERPQ96FX8 193 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NIPSNAP1Q9BPW8 284 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 CDADC1Q9BWV3 514 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 DGCR6LQ9BY27 220 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 PRRG3Q9BZD7 231 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 NUAK2Q9H093 628 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 OR51B6Q9H340 312 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 C1orf198Q9H425 327 aa6.28□□□□□ -1.4
NPLOC4-221ENST00000625705 FN3KQ9H479 309 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms