RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ABHD12BQ7Z5M8 362 aaPredicted RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 KDM8Q8N371 416 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 C17orf78Q8N4C9 275 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 TMEM99Q8N816 258 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 POMGNT2Q8NAT1 580 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 CYB561A3Q8NBI2 242 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 SLC37A3Q8NCC5 494 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 C1orf162Q8NEQ5 155 aaPredicted RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 OR9K2Q8NGE7 335 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 OR4K13Q8NH42 304 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 PERPQ96FX8 193 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 LRR1Q96L50 414 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 TEX12Q9BXU0 123 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 NDEL1Q9GZM8 345 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 AMBNQ9NP70 447 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 PLCXD1Q9NUJ7 323 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 B3GAT1Q9P2W7 334 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 KLHL21Q9UJP4 597 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 CCDC182A6NF36 153 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 TRIM64CA6NLI5 447 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 RIIAD1A6NNX1 92 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 RNF13O43567 381 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 RAD51DO75771 328 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 INHBBP09529 407 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 AHCYP23526 432 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 PTAFRP25105 342 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 MPGP29372 298 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 SDHAP31040 664 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 PTH2RP49190 550 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 SLC35A2P78381 396 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 MELKQ14680 651 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 NIPAL3Q6P499 406 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 PLBD1Q6P4A8 553 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 TMEM154Q6P9G4 183 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 AHSA2Q719I0 299 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 AAED1Q7RTV5 226 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 CPOQ8IVL8 374 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 WDFY1Q8IWB7 410 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 ZIC4Q8N9L1 334 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 ANKK1Q8NFD2 765 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 TSPAN14Q8NG11 270 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 OR52E2Q8NGJ4 325 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 ZNF519Q8TB69 540 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 SMAP2Q8WU79 429 aaPredicted RBP11.07□□□□□ -0.64
PNKP-217ENST00000625216 GGHQ92820 318 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 TRMT61AQ96FX7 289 aaKnown RBP11.07□□□□□ -0.64
PNKP-217ENST00000625216 BOD1Q96IK1 185 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 SIGLEC11Q96RL6 698 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 DUSP21Q9H596 190 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 SLC7A10Q9NS82 523 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 FKBP14Q9NWM8 211 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 PSORS1C1Q9UIG5 152 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 ZNF346Q9UL40 294 aaKnown RBP11.07□□□□□ -0.64
PNKP-217ENST00000625216 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 B3GALT5Q9Y2C3 310 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
PNKP-217ENST00000625216 ARID1AO14497 2285 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 NF1P21359 2839 aa11.07□□□□□ -0.64
PNKP-217ENST00000625216 H7C1C5 153 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 OVOL3O00110 214 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 PRODHO43272 600 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 IDH3BO43837 385 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 OR6A2O95222 327 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 IFNGP01579 166 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 ITGA5P08648 1049 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 ADRA2AP08913 450 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 DANCRP0C864 163 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 DBTP11182 482 aaKnown RBP11.06□□□□□ -0.64
PNKP-217ENST00000625216 ZNF3P17036 446 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 PAX7P23759 505 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 CDKN2AP42771 156 aaKnown RBP11.06□□□□□ -0.64
PNKP-217ENST00000625216 SLC15A1P46059 708 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 LCN6P62502 163 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 POU3F1Q03052 451 aaPredicted RBP11.06□□□□□ -0.64
PNKP-217ENST00000625216 BLMHQ13867 455 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 TSPO2Q5TGU0 170 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 MEDAGQ5VYS4 303 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 NXNL2Q5VZ03 156 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 GPR139Q6DWJ6 353 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 ZNF773Q6PK81 442 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 NHLRC1Q6VVB1 395 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 CREB3L2Q70SY1 520 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 GPAT4Q86UL3 456 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 NPEPL1Q8NDH3 523 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 OR9Q1Q8NGQ5 310 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 OR52N5Q8NH56 324 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 ASB10Q8WXI3 467 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 Q96MF0 132 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 ZNF385AQ96PM9 386 aaKnown RBP11.06□□□□□ -0.64
PNKP-217ENST00000625216 DDOQ99489 341 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 MRPS26Q9BYN8 205 aaKnown RBP11.06□□□□□ -0.64
PNKP-217ENST00000625216 SLCO5A1Q9H2Y9 848 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 TXNIPQ9H3M7 391 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 FAIMQ9NVQ4 179 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 SCN3BQ9NY72 215 aa11.06□□□□□ -0.64
PNKP-217ENST00000625216 ERVK-18Q9QC07 812 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms