RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 OR13C5Q8NGS8 318 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 OR13C2Q8NGS9 318 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 TMEM19Q96HH6 336 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 NUDT22Q9BRQ3 303 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 PPA2Q9H2U2 334 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 FOXJ3Q9UPW0 622 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 C5orf49A4QMS7 147 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 TMEM212A6NML5 194 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 IMPA2O14732 288 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 NID1P14543 1247 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 PROZP22891 400 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 YBX1P67809 324 aaKnown RBP5.78□□□□□ -1.48
CDKL5-205ENST00000623535 ADAMTSL4Q6UY14 1074 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 C1orf174Q8IYL3 243 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 NKAIN3Q8N8D7 197 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 OR8J3Q8NGG0 315 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 OR1S2Q8NGQ3 325 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 MED30Q96HR3 178 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 MRGPRX2Q96LB1 330 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 LMF1Q96S06 567 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 SAP30LQ9HAJ7 183 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 MOKQ9UQ07 419 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 PPP1R11O60927 126 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-205ENST00000623535 FAM87AP0C7U9 286 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 GPR4P46093 362 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 TNFRSF17Q02223 184 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 DUSP2Q05923 314 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 LETMD1Q6P1Q0 360 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 Q6ZN92 141 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 APCDD1Q8J025 514 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 LILRA2Q8N149 483 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 SYT8Q8NBV8 401 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 SYNPRQ8TBG9 265 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 CITED4Q96RK1 184 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 UQCC2Q9BRT2 126 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 TXNRD2Q9NNW7 524 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 MROH2AA6NES4 1674 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 N4BP2Q86UW6 1770 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-205ENST00000623535 TMEM72A0PK05 275 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 WNT9BO14905 357 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 HTR1EP28566 365 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 SLC25A40Q8TBP6 338 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 PTPMT1Q8WUK0 201 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-205ENST00000623535 SEMA4GQ9NTN9 838 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 NAGKQ9UJ70 344 aa5.78□□□□□ -1.48
CDKL5-205ENST00000623535 EXO1Q9UQ84 846 aaKnown RBP5.78□□□□□ -1.48
CDKL5-205ENST00000623535 ANTXRLA6NF34 631 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 DOC2BQ14184 412 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 ZNF266Q14584 549 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 ZXDCQ2QGD7 858 aaPredicted RBP5.77□□□□□ -1.48
CDKL5-205ENST00000623535 CFAP77Q6ZQR2 320 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 ZFAND4Q86XD8 727 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 OR52M1Q8NGK5 317 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 OR13G1Q8NGZ3 307 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 FETUBQ9UGM5 382 aa5.77□□□□□ -1.48
CDKL5-205ENST00000623535 SF3B6Q9Y3B4 125 aaKnown RBP5.77□□□□□ -1.48
CDKL5-205ENST00000623535 OR2T8A6NH00 312 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 WASH4PA8MWX3 477 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 DFFBO76075 338 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 CAPNS1P04632 268 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 SCGB1C2P0DMR2 95 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 PIPP12273 146 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 PPP3CBP16298 524 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 CSNK1DP48730 415 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 PSMB3P49720 205 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 DSCR4P56555 118 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 HERVK_113P61574 105 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ZNF260Q3ZCT1 412 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 C6orf52Q5T4I8 152 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 GDF7Q7Z4P5 450 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 SPPL3Q8TCT6 385 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 PACRGQ96M98 296 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 OCIAD1Q9NX40 245 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 FAM208AQ9UK61 1670 aaKnown RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 TMED7-TICAM2A0A0A6YYA0 188 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ZNF83P51522 516 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 CLDN15P56746 228 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ANKRD22Q5VYY1 191 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 B3GNT7Q8NFL0 401 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 SGK494Q96LW2 274 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ALG12Q9BV10 488 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 MMP27Q9H306 513 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 CXorf21Q9HAI6 301 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 TMED7Q9Y3B3 224 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 PENKP01210 267 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 HIST1H1EP10412 219 aaKnown RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 RAB3BP20337 219 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 PJVKQ0ZLH3 352 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 GPR19Q15760 415 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 MAMSTRQ6ZN01 415 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ANKRD53Q8N9V6 530 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 YTHDF1Q9BYJ9 559 aaKnown RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 TTC3P53804 2025 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ZNF705FA8MVS1 300 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 BHLHE40O14503 412 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 SHOX2O60902 331 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 LILRA1O75019 489 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 OPN1LWP04000 364 aa5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ZNF705DP0CH99 300 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-205ENST00000623535 ZNF705BP0CI00 300 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms