RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 SUPT7LO94864 414 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 SERPINE1P05121 402 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 JUNP05412 331 aaKnown RBP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 ZNF43P17038 809 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 AHCYP23526 432 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 STIP1P31948 543 aaKnown RBP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 NCBP2P52298 156 aaKnown RBP eCLIP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 PPP1CBP62140 327 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 TRA2BP62995 288 aaKnown RBP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 ZBED6P86452 979 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 MAB21L1Q13394 359 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 KIR3DS1Q14943 382 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 C9orf152Q5JTZ5 239 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 CDKL4Q5MAI5 379 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 CCNJQ5T5M9 372 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 COMMD6Q7Z4G1 85 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 SPATA12Q7Z6I5 190 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 ANKMY2Q8IV38 441 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 HOMEZQ8IX15 550 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 SKA3Q8IX90 412 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 DRAM1Q8N682 238 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 POM121L12Q8N7R1 296 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 COX18Q8N8Q8 333 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 CDRT4Q8N9R6 151 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 VPS37AQ8NEZ2 397 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 OR11H1Q8NG94 326 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 OR5D13Q8NGL4 314 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 OR11L1Q8NGX0 322 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 FGFBP3Q8TAT2 258 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 DCAKDQ8WVC6 231 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 NABP1Q96AH0 204 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 DUS3LQ96G46 650 aaKnown RBP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 FOXB1Q99853 325 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 TPSG1Q9NRR2 321 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 FAM212BQ9NTI7 297 aaPredicted RBP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 C20orf96Q9NUD7 363 aaPredicted RBP4.92□□□□□ -1.62
CDKL5-204ENST00000623364 GIN1Q9NXP7 522 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 APLNQ9ULZ1 77 aa4.92□□□□□ -1.62
CDKL5-204ENST00000623364 IGHV3-64DA0A0J9YX35 117 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 A0A0U1RQV1 116 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 LIPT2A6NK58 231 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 LGALS8O00214 317 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 PPP6CO00743 305 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 AKAP8O43823 692 aaKnown RBP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 SCN2BO60939 215 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 CCDC175P0C221 793 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 PGA5P0DJD9 388 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 PRPS2P11908 318 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 MAPK1P28482 360 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 CXCR5P32302 372 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 MAP3K8P41279 467 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 KIR3DL2P43630 455 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 HTR3AP46098 478 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 CDX1P47902 265 aaPredicted RBP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 PSG7Q13046 419 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 SKP2Q13309 424 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 OR8B8Q15620 311 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 CPSF6Q16630 551 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 INTS11Q5TA45 600 aaKnown RBP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 LIPJQ5W064 366 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 HCP5Q6MZN7 132 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 SLC16A14Q7RTX9 510 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 DPPA2Q7Z7J5 298 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 DHDDSQ86SQ9 333 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 METTL4Q8N3J2 472 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 ABHD4Q8TB40 342 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 TMEM255BQ8WV15 326 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 MAIP1Q8WWC4 291 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 HOXB13Q92826 284 aaPredicted RBP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 ZNF669Q96BR6 464 aaPredicted RBP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 FOXRED1Q96CU9 486 aaPredicted RBP4.91□□□□□ -1.62
CDKL5-204ENST00000623364 ELP4Q96EB1 424 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 OVOL2Q9BRP0 275 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 TAPBPLQ9BX59 468 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 DGCR6LQ9BY27 220 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 OSBPL8Q9BZF1 889 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 CD274Q9NZQ7 290 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 ACTR3BQ9P1U1 418 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 LRP12Q9Y561 859 aa4.91□□□□□ -1.62
CDKL5-204ENST00000623364 TMED7-TICAM2A0A0A6YYA0 188 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 TRAV38-1A0A0B4J264 116 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 SHISA3A0PJX4 238 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 PRAMEF27A3QJZ7 478 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 WDR91A4D1P6 747 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 IGLL5B9A064 214 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 URI1O94763 535 aaPredicted RBP4.9□□□□□ -1.63
CDKL5-204ENST00000623364 PDYNP01213 254 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 IFNB1P01574 187 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 S100BP04271 92 aaPredicted RBP4.9□□□□□ -1.63
CDKL5-204ENST00000623364 PTMAP06454 111 aaKnown RBP4.9□□□□□ -1.63
CDKL5-204ENST00000623364 GSTM3P21266 225 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 CBLP22681 906 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 WNT5AP41221 380 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 CCT3P49368 545 aaKnown RBP4.9□□□□□ -1.63
CDKL5-204ENST00000623364 P2RY4P51582 365 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 DYNLT3P51808 116 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 MAP2K6P52564 334 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 ARHGDIAP52565 204 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms