RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PPIL3Q9H2H8 161 aaKnown RBP14.59□□□□□ -0.07
LDB3-208ENST00000623007 TMEM185BQ9H7F4 350 aa14.59□□□□□ -0.07
LDB3-208ENST00000623007 LRFN1Q9P244 771 aa14.59□□□□□ -0.07
LDB3-208ENST00000623007 ETV7Q9Y603 341 aa14.59□□□□□ -0.07
LDB3-208ENST00000623007 R4GMQ9 66 aa14.59□□□□□ -0.07
LDB3-208ENST00000623007 V9GY05 133 aa14.59□□□□□ -0.07
LDB3-208ENST00000623007 BDP1A6H8Y1 2624 aa14.59□□□□□ -0.07
LDB3-208ENST00000623007 PRR32B1ATL7 298 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 NCR1O76036 304 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 UBCP0CG48 685 aaKnown RBP14.58□□□□□ -0.07
LDB3-208ENST00000623007 PITPNBP48739 271 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 INPP1P49441 399 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 MMP16P51512 607 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 ZNF133P52736 654 aaPredicted RBP14.58□□□□□ -0.07
LDB3-208ENST00000623007 LSM6P62312 80 aaKnown RBP14.58□□□□□ -0.07
LDB3-208ENST00000623007 DBPQ10586 325 aaPredicted RBP14.58□□□□□ -0.07
LDB3-208ENST00000623007 STPG1Q5TH74 334 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 TMEM244Q5VVB8 128 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 MZT2BQ6NZ67 158 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 MDGA2Q7Z553 956 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 Q8N402 240 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 RNF133Q8WVZ7 376 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 TXNDC15Q96J42 360 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 EXTL2Q9UBQ6 330 aa14.58□□□□□ -0.07
LDB3-208ENST00000623007 SDK2Q58EX2 2172 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 TRBV5-7A0A0A0MS05 114 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 A0A1W2PNU3 283 aaPredicted RBP14.58□□□□□ -0.08
LDB3-208ENST00000623007 MEGF11A6BM72 1044 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 TRABD2BA6NFA1 517 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 IFITM5A6NNB3 132 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 PSMD9O00233 223 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 H2BFMP0C1H6 154 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 CD97P48960 835 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 TOMM20Q15388 145 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 ETFDHQ16134 617 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 UBE2NLQ5JXB2 153 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 FAM27D1Q5T7N8 215 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 SLC25A47Q6Q0C1 308 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 DCXRQ7Z4W1 244 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 CATSPERDQ86XM0 798 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 SAMD12Q8N8I0 201 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 OR5M1Q8NGP8 315 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 ZNF671Q8TAW3 534 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 ST7LQ8TDW4 575 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 PAQR5Q9NXK6 330 aaPredicted RBP14.58□□□□□ -0.08
LDB3-208ENST00000623007 ETAA1Q9NY74 926 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 CYB5R1Q9UHQ9 305 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 FOXJ3Q9UPW0 622 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 RCE1Q9Y256 329 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 LRP12Q9Y561 859 aa14.58□□□□□ -0.08
LDB3-208ENST00000623007 LOC101059948A0A1B0GTJ6 334 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 PRKAR1AP10644 381 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 ACHEP22303 614 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 DNASE1L1P49184 302 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 SOX8P57073 446 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 WDR38Q5JTN6 314 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 CEP78Q5JTW2 689 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 C10orf128Q5T292 105 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 ZNF468Q5VIY5 522 aaPredicted RBP14.57□□□□□ -0.08
LDB3-208ENST00000623007 B3GNTL1Q67FW5 361 aaPredicted RBP14.57□□□□□ -0.08
LDB3-208ENST00000623007 STAC2Q6ZMT1 411 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 CREB3L2Q70SY1 520 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 NR2C2APQ86WQ0 139 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 LSRQ86X29 649 aaPredicted RBP14.57□□□□□ -0.08
LDB3-208ENST00000623007 SNX29P2Q8IUI4 249 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 OR13C5Q8NGS8 318 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 RAB40AQ8WXH6 277 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 NKD1Q969G9 470 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 SFXN2Q96NB2 322 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 HHLA2Q9UM44 414 aa14.57□□□□□ -0.08
LDB3-208ENST00000623007 SMIM30A4D0T7 59 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 PMS2P1A4D2B8 440 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 MAGEB3O15480 346 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 UBL3O95164 117 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 CSF3P09919 207 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 ELK1P19419 428 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 CSRP1P21291 193 aaKnown RBP14.56□□□□□ -0.08
LDB3-208ENST00000623007 ENPP1P22413 925 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 ITGA3P26006 1051 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 CSNK1A1P48729 337 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 SUCLG1P53597 346 aaKnown RBP14.56□□□□□ -0.08
LDB3-208ENST00000623007 FMODQ06828 376 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 CAMK2DQ13557 499 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 TSEN15Q8WW01 171 aaKnown RBP14.56□□□□□ -0.08
LDB3-208ENST00000623007 C11orf40Q8WZ69 217 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 MCHR2Q969V1 340 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 CPNE4Q96A23 557 aaPredicted RBP14.56□□□□□ -0.08
LDB3-208ENST00000623007 TMEM106AQ96A25 262 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 BRD7Q9NPI1 651 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 C14orf119Q9NWQ9 140 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 GLTPQ9NZD2 209 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 DHDHQ9UQ10 334 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 POLR1DQ9Y2S0 133 aa14.56□□□□□ -0.08
LDB3-208ENST00000623007 KLF13Q9Y2Y9 288 aaPredicted RBP14.56□□□□□ -0.08
LDB3-208ENST00000623007 A0A1W2PQ09 198 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 ACOD1A6NK06 481 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 ANXA2P2A6NMY6 339 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 ZNF878C9JN71 531 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 DVL2O14641 736 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 APOC1P02654 83 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms