RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DPPA5A6NC42 116 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 H0YAE9 185 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SLC1A7O00341 560 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 BHLHE40O14503 412 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SOCS6O14544 535 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 UBL3O95164 117 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 CCL2P13500 99 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 GNLYP22749 145 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 CTSSP25774 331 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 RIPPLY1Q0D2K3 151 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 IKZF1Q13422 519 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 IGFBP7Q16270 282 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 HFEQ30201 348 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 CEP78Q5JTW2 689 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SLX4IPQ5VYV7 408 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 GDPD3Q7L5L3 318 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 RIMKLAQ8IXN7 391 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 OR2Z1Q8NG97 314 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 PAQR8Q8TEZ7 354 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 ITFG2Q969R8 447 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SLC26A1Q9H2B4 701 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 LPAR2Q9HBW0 351 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 KCNN3Q9UGI6 736 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SLC22A23A1A5C7 686 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 PRSS37A4D1T9 235 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 TRIM64A6NGJ6 449 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 CCRL2O00421 344 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SERPINA5P05154 406 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 LPLP06858 475 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 T-ENOLP0DO92 83 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 GK3PQ14409 553 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 ADAM5Q6NVV9 412 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 GLRX5Q86SX6 157 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 PTOV1Q86YD1 416 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 OR51T1Q8NGJ9 327 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 TMEM163Q8TC26 289 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 GMPPAQ96IJ6 420 aaPredicted RBP8.15□□□□□ -1.11
HDAC9-229ENST00000622668 NIPSNAP1Q9BPW8 284 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 SYT3Q9BQG1 590 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 HMG20AQ9NP66 347 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 RAB9BQ9NP90 201 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 ENPP5Q9UJA9 477 aa8.15□□□□□ -1.11
HDAC9-229ENST00000622668 PATJQ8NI35 1801 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 PLXNA4Q9HCM2 1894 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ZC3H12DA2A288 527 aaKnown RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 K7ENP7 123 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 M0R233 179 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ABCD4O14678 606 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 NME2P1O60361 137 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 MT-ND2P03891 347 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 NME2P22392 152 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 APEX1P27695 318 aaKnown RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 CX3CR1P49238 355 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 GRB2P62993 217 aaKnown RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ADARB1P78563 741 aaKnown RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ESCO2Q56NI9 601 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 PGBD2Q6P3X8 592 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 INO80CQ6PI98 192 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 PXKQ7Z7A4 578 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 LINC01560Q8TB33 94 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 S100A16Q96FQ6 103 aaKnown RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ANGPTL4Q9BY76 406 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 CXorf56Q9H5V9 222 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ING1Q9UK53 422 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 LAMP3Q9UQV4 416 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 TEX13DA0A0J9YY54 714 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 METTL15A6NJ78 407 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 J3QKU1 62 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 SELEP16581 610 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 NFYBP25208 207 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 MVKQ03426 396 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 FMODQ06828 376 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF141Q15928 474 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF74Q16587 644 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF468Q5VIY5 522 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 SLC30A7Q8NEW0 376 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 SYNPRQ8TBG9 265 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 SLAMF6Q96DU3 332 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 GIMAP5Q96F15 307 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 PALMDQ9NP74 551 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 PLEKHJ1Q9NW61 149 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 FLRT3Q9NZU0 649 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 PDCD11Q14690 1871 aaKnown RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 C4orf51C9J302 202 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 TGFBR2P37173 567 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 CHODLQ9H9P2 273 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 NKX1-2Q9UD57 310 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-229ENST00000622668 NUP50Q9UKX7 468 aa8.14□□□□□ -1.11
HDAC9-229ENST00000622668 SELENOFO60613 162 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 KLF7O75840 302 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 RAC2P15153 192 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 GPR50Q13585 617 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CHRFAM7AQ494W8 412 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 THOC7Q6I9Y2 204 aaKnown RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CXorf67Q86X51 503 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF615Q8N8J6 731 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms