RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LYPD6BQ8NI32 183 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 MARCH1Q8TCQ1 289 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 TMEM158Q8WZ71 300 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 FAM3DQ96BQ1 224 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 TEKT3Q9BXF9 490 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 IQCGQ9H095 443 aaKnown RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 NTN4Q9HB63 628 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 PDP1Q9P0J1 537 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF629Q9UEG4 869 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-213ENST00000622183 CD84Q9UIB8 345 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 NEU3Q9UQ49 428 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 RLFQ13129 1914 aa3.25□□□□□ -1.89
CPNE3-213ENST00000622183 PHLPP2Q6ZVD8 1323 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 KCNE1BA0A087WTH5 132 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 GOLGA8TH3BQL2 631 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 PES1O00541 588 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 SCAMP2O15127 329 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 SS18L1O75177 396 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 CLDN11O75508 207 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 FGFR1OPO95684 399 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 SERPINE2P07093 398 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 STAG3L3P0CL85 134 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 MDKP21741 143 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 OMGP23515 440 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 RPS5P46782 204 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 RPS10P46783 165 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 CRISP1P54107 249 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 STXBP1P61764 594 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 SPAG1Q07617 926 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 MAB21L1Q13394 359 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 OR7A5Q15622 319 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 RSPO1Q2MKA7 263 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 CYB5R2Q6BCY4 276 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 ABHD13Q7L211 337 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 HDDC2Q7Z4H3 204 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 TMCO2Q7Z6W1 182 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 TMEM150AQ86TG1 271 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 OAFQ86UD1 273 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 MKXQ8IYA7 352 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 MICU2Q8IYU8 434 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 TTC29Q8NA56 475 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 OR2A1Q8NGT9 310 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 OR4S2Q8NH73 311 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 WFIKKN1Q96NZ8 548 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 CDC42EP4Q9H3Q1 356 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 CCNB1IP1Q9NPC3 277 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 KCNJ16Q9NPI9 418 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF331Q9NQX6 463 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 MRPL22Q9NWU5 206 aaKnown RBP3.24□□□□□ -1.89
CPNE3-213ENST00000622183 WDR62O43379 1518 aa3.24□□□□□ -1.89
CPNE3-213ENST00000622183 TRBV6-6A0A0A6YYG2 114 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 CIB4A0PJX0 185 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 SUPT3HB4E1H0 165 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 TEX46H3BTG2 121 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 ICOSLGO75144 302 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 FKBP6O75344 327 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 RAB3DO95716 219 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 GNAO1P09471 354 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 PSG2P11465 335 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 MGMTP16455 207 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF133P52736 654 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 EIF3EP60228 445 aaKnown RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 TRAM2Q15035 370 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF726P1Q15940 193 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF658BQ4V348 819 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 OR5K2Q8NHB8 316 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 NUBPLQ8TB37 319 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 GIMAP1Q8WWP7 306 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 IL22RA2Q969J5 263 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 CYYR1Q96J86 154 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 DNAJC1Q96KC8 554 aaKnown RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 HDHD3Q9BSH5 251 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 ACTR3CQ9C0K3 210 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 LYRM4Q9HD34 91 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 ST3GAL6Q9Y274 331 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 MRPS18BQ9Y676 258 aaKnown RBP3.23□□□□□ -1.89
CPNE3-213ENST00000622183 KCNE3Q9Y6H6 103 aa3.23□□□□□ -1.89
CPNE3-213ENST00000622183 MAP3K15Q6ZN16 1313 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 IGLV11-55A0A075B6I3 123 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 A0A1B0GTQ1 180 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 NUPL2O15504 423 aaKnown RBP3.22□□□□□ -1.89
CPNE3-213ENST00000622183 CCNB2O95067 398 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 SLC25A27O95847 323 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 CT45A6P0DMU7 189 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 CT45A5P0DMU8 189 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 CT45A7P0DMV0 189 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 RALBP11234 206 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 MAGEA1P43355 309 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF136P52737 540 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 SP4Q02446 784 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 TCP10Q12799 353 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 ZSCAN26Q16670 478 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 CT45A1Q5HYN5 189 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 SPESP1Q6UW49 350 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 MBOAT1Q6ZNC8 495 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 JAGN1Q8N5M9 183 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 ZNF433Q8N7K0 673 aaPredicted RBP3.22□□□□□ -1.89
CPNE3-213ENST00000622183 ARIH2OSQ8N7S6 290 aa3.22□□□□□ -1.89
CPNE3-213ENST00000622183 OR9G4Q8NGQ1 327 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms