RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 A0A1W2PRG6 482 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 ZSCAN5BA6NJL1 495 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 B4DSR2 109 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 H7C1C5 153 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 FFAR1O14842 300 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 TCF21O43680 179 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 DEAF1O75398 565 aaPredicted RBP9.73□□□□□ -0.85
CPNE3-210ENST00000621245 FARS2O95363 451 aaKnown RBP9.73□□□□□ -0.85
CPNE3-210ENST00000621245 MSMBP08118 114 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF26P17031 533 aaPredicted RBP9.73□□□□□ -0.85
CPNE3-210ENST00000621245 CCNOP22674 350 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 RBM34P42696 430 aaKnown RBP9.73□□□□□ -0.85
CPNE3-210ENST00000621245 YAP1P46937 504 aaKnown RBP9.73□□□□□ -0.85
CPNE3-210ENST00000621245 UCP2P55851 309 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 LCN6P62502 163 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 TBC1D28Q2M2D7 210 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 SLC36A2Q495M3 483 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 SLC25A47Q6Q0C1 308 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 USP51Q70EK9 711 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 VTCN1Q7Z7D3 282 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 GLCCI1Q86VQ1 547 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 RFLNBQ8N5W9 214 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 POU5F2Q8N7G0 328 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 LRRC75AQ8NAA5 344 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 OR8J3Q8NGG0 315 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 OR1J1Q8NGS3 322 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF519Q8TB69 540 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 TPD52L3Q96J77 140 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 POM121L2Q96KW2 1035 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 WNT5BQ9H1J7 359 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 G6PC2Q9NQR9 355 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 FGFR1OP2Q9NVK5 253 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 FBXL3Q9UKT7 428 aa9.73□□□□□ -0.85
CPNE3-210ENST00000621245 TRAV27A0A087WT01 109 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 LOC100653049A0A140TA62 436 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 FAM220BPB1ANY3 271 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 IMPA2O14732 288 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 KRT34O76011 436 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 LAP3P28838 519 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 LSP1P33241 339 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 DAP3P51398 398 aaKnown RBP9.72□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF84P51523 738 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 MRPS34P82930 218 aaKnown RBP9.72□□□□□ -0.85
CPNE3-210ENST00000621245 PSG4Q00888 419 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 HSF2Q03933 536 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 CD47Q08722 323 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 DBPQ10586 325 aaPredicted RBP9.72□□□□□ -0.85
CPNE3-210ENST00000621245 CYLC2Q14093 348 aaPredicted RBP9.72□□□□□ -0.85
CPNE3-210ENST00000621245 SGCAQ16586 387 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 UGT2A3Q6UWM9 527 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 HDXQ7Z353 690 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 OR13C2Q8NGS9 318 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 SLC25A40Q8TBP6 338 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 LIPHQ8WWY8 451 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 RCN3Q96D15 328 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 ECSITQ9BQ95 431 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF665Q9H7R5 613 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 CMTM6Q9NX76 183 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 ARMCX1Q9P291 453 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF346Q9UL40 294 aaKnown RBP9.72□□□□□ -0.85
CPNE3-210ENST00000621245 HIF3AQ9Y2N7 669 aa9.72□□□□□ -0.85
CPNE3-210ENST00000621245 IGHV1-69-2A0A0G2JMI3 117 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 C5orf49A4QMS7 147 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 SPRY3O43610 288 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 NGFP01138 241 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 IGHV1-46P01743 117 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 IGHV3-13P01766 116 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 IGHMP01871 453 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 TFP02787 698 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 IFI30P13284 250 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 ADRA2CP18825 462 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 STOMP27105 288 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 KDELR2P33947 212 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 APLNRP35414 380 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 MMP15P51511 669 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 MRPS11P82912 194 aaKnown RBP9.71□□□□□ -0.86
CPNE3-210ENST00000621245 ENDOGQ14249 297 aaKnown RBP9.71□□□□□ -0.86
CPNE3-210ENST00000621245 NRN1LQ496H8 165 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 ALG10Q5BKT4 473 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 METTL21CQ5VZV1 264 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 ZNF774Q6NX45 483 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 TMEM154Q6P9G4 183 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 REC114Q7Z4M0 266 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 TSEN54Q7Z6J9 526 aaKnown RBP9.71□□□□□ -0.86
CPNE3-210ENST00000621245 NRMQ8IXM6 262 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 OR51F2Q8NH61 342 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 RASSF5Q8WWW0 418 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 GEMIN6Q8WXD5 167 aaKnown RBP9.71□□□□□ -0.86
CPNE3-210ENST00000621245 MARS2Q96GW9 593 aaKnown RBP9.71□□□□□ -0.86
CPNE3-210ENST00000621245 PRRC1Q96M27 445 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 ZNF416Q9BWM5 594 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 TMPRSS13Q9BYE2 586 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 OR2J1Q9GZK6 312 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 TXNIPQ9H3M7 391 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 C1orf198Q9H425 327 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 VIPAS39Q9H9C1 493 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 SIAEQ9HAT2 523 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 EMC7Q9NPA0 242 aa9.71□□□□□ -0.86
CPNE3-210ENST00000621245 BAG5Q9UL15 447 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms