RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 SFXN3Q9BWM7 321 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 JAM3Q9BX67 310 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 YIPF3Q9GZM5 350 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 CCDC90BQ9GZT6 254 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 NELFAQ9H3P2 528 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 POLE4Q9NR33 117 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 MALT1Q9UDY8 824 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 Q9UFV3 132 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 PROCRQ9UNN8 238 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 OSGIN2Q9Y236 505 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 MEMO1Q9Y316 297 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 PCDHGB1Q9Y5G3 927 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 SNX5Q9Y5X3 404 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 COMMD3-BMI1R4GMX3 469 aa7.1□□□□□ -1.27
TARDBP-219ENST00000617757 ATRXP46100 2492 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 KMT2BQ9UMN6 2715 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 DAPL1A0PJW8 107 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 HSPB2A8KAH6 182 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 C12orf71A8MTZ7 269 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZNF99A8MXY4 864 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 B8ZZF3 427 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 IL18BPO95998 194 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 PRB1P04280 392 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ITGA5P08648 1049 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OR2T7P0C7T2 308 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 LIMS3P0CW19 117 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 LIMS4P0CW20 117 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ATP6V1B1P15313 513 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 NPR2P20594 1047 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 MPGP29372 298 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OPRM1P35372 400 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 GUCA1AP43080 201 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ETV1P50549 477 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 LSM6P62312 80 aaKnown RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ACTC1P68032 377 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ACTA1P68133 377 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ADAM8P78325 824 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ARF1P84077 181 aaKnown RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZNF85Q03923 595 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 TLE1Q04724 770 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 EMX1Q04741 257 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 IRF3Q14653 427 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 HSPB2Q16082 182 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 FAM27BQ5VT28 67 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 C9orf135Q5VTT2 229 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 Q6ZT83 130 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZNF627Q7L945 461 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 DPY19L4Q7Z388 723 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ABHD12BQ7Z5M8 362 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 LHFPL3Q86UP9 236 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 SPARTQ8N0X7 666 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 RFLNBQ8N5W9 214 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ACBD7Q8N6N7 88 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZNF610Q8N9Z0 462 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OR10H4Q8NGA5 316 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OR6N2Q8NGY6 317 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OR2T27Q8NH04 317 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OTOSQ8NHW6 89 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 RNF166Q96A37 237 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 TBX5Q99593 518 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 FOXB1Q99853 325 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZNF649Q9BS31 505 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 CDCA4Q9BXL8 241 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 MRPS26Q9BYN8 205 aaKnown RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 OPN3Q9H1Y3 402 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 SIAEQ9HAT2 523 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 EMC7Q9NPA0 242 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 INPP5EQ9NRR6 644 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 TMEM38BQ9NVV0 291 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ERVK13-1Q9NX77 482 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 TAS2R16Q9NYV7 291 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 ZNF629Q9UEG4 869 aaPredicted RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 CLEC2DQ9UHP7 191 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 COPS3Q9UNS2 423 aa7.09□□□□□ -1.27
TARDBP-219ENST00000617757 EXOSC1Q9Y3B2 195 aaKnown RBP7.09□□□□□ -1.27
TARDBP-219ENST00000617757 TPRP12270 2363 aaKnown RBP7.09□□□□□ -1.28
TARDBP-219ENST00000617757 A0A1W2PQL4 384 aaPredicted RBP7.08□□□□□ -1.28
TARDBP-219ENST00000617757 ZNF670-ZNF695F2Z2N8 137 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 CCL21O00585 134 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 PHYHO14832 338 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 SEC14L2O76054 403 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 SPARCP09486 303 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 B4GALT1P15291 398 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 MSR1P21757 451 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 PCMT1P22061 227 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 IGHV1-2P23083 117 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 CD79BP40259 229 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 MAP2K4P45985 399 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 TUBA4AP68366 448 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 EIF2B1Q14232 305 aaKnown RBP7.08□□□□□ -1.28
TARDBP-219ENST00000617757 ENDOGQ14249 297 aaKnown RBP7.08□□□□□ -1.28
TARDBP-219ENST00000617757 GALEQ14376 348 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 NRN1LQ496H8 165 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 SLC18B1Q6NT16 456 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 TMEM154Q6P9G4 183 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 KLHL24Q6TFL4 600 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 ZNF813Q6ZN06 617 aa7.08□□□□□ -1.28
TARDBP-219ENST00000617757 BEND4Q6ZU67 534 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms