RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NIPAL2Q9H841 368 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 MTHFD2LQ9H903 347 aaPredicted RBP7.53□□□□□ -1.2
GPC6-202ENST00000617456 CHODLQ9H9P2 273 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 NANOGQ9H9S0 305 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 ACER3Q9NUN7 267 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 MED9Q9NWA0 146 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 TRAPPC4Q9Y296 219 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 HDGFL3Q9Y3E1 203 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 MALRD1Q5VYJ5 2156 aa7.53□□□□□ -1.2
GPC6-202ENST00000617456 IGKV3D-15A0A087WSY6 115 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 A0A0B4J293 547 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 RNF103-CHMP3A0A140T963 221 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 C9orf170A2RU37 121 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 MPTX1A8MV57 137 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 SHISA9B4DS77 424 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 AKR7A2O43488 359 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 EFNA2O43921 213 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 LMX1BO60663 402 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 FCMRO60667 390 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 CYTIPO60759 359 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 SNNO75324 88 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 GCM2O75603 506 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 SLC22A5O76082 557 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 CSTAP01040 98 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 MBP02144 154 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 LINC00614P0C842 121 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 IGHV4-31P0DP07 118 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 ZP3P21754 424 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 SLC7A1P30825 629 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 PGM1P36871 562 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 NUP62P37198 522 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 CEACAM6P40199 344 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 ACAA2P42765 397 aaKnown RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 KHKP50053 298 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 GNG10P50151 68 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 ERFP50548 548 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 AQP4P55087 323 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 VLDLRP98155 873 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 LIPEQ05469 1076 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 LOXL1Q08397 574 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 FOXF1Q12946 379 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 QPRTQ15274 297 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 NRF1Q16656 503 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 TMEM176BQ3YBM2 270 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 DNLZQ5SXM8 178 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 ATAD3CQ5T2N8 411 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 PDZK1Q5T2W1 519 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 TTC33Q6PID6 262 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 TMPPEQ6ZT21 453 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 BHLHA15Q7RTS1 189 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 C16orf62Q7Z3J2 963 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 MTDHQ86UE4 582 aaKnown RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 DTX2Q86UW9 622 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 ANKRD46Q86W74 232 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 TUSC5Q8IXB3 177 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 ZNF525Q8N782 197 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 OR10H5Q8NGA6 315 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 OR4A15Q8NGL6 344 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 C10orf82Q8WW14 230 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 SNAPC3Q92966 411 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 SLC35G5Q96KT7 338 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 PTDSS2Q9BVG9 487 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 YTHDF1Q9BYJ9 559 aaKnown RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 POTEKPQ9BYX7 375 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 C20orf27Q9GZN8 174 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.52□□□□□ -1.21
GPC6-202ENST00000617456 TMEM45AQ9NWC5 275 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 TMEM160Q9NX00 188 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 TREM2Q9NZC2 230 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 WDR45Q9Y484 360 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 KCNE3Q9Y6H6 103 aa7.52□□□□□ -1.21
GPC6-202ENST00000617456 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 METTL15A6NJ78 407 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 J3QRK9 145 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 KLF11O14901 512 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZNF208O43345 1280 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 LYZL6O75951 148 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 PMS2P2O95744 297 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 IFNA10P01566 189 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 PGRP06401 933 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SBK2P0C263 348 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 EFNA1P20827 205 aaPredicted RBP7.51□□□□□ -1.21
GPC6-202ENST00000617456 IGFBP5P24593 272 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SHC1P29353 583 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 S100A3P33764 101 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SFTPDP35247 375 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SOAT1P35610 550 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 OR3A2P47893 321 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SLC16A1P53985 500 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 DSCR9P59020 149 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 BST1Q10588 318 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 MPP2Q14168 576 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 RAB35Q15286 201 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 GPR68Q15743 365 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZNF181Q2M3W8 571 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SLC27A4Q6P1M0 643 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZNF782Q6ZMW2 699 aaPredicted RBP7.51□□□□□ -1.21
GPC6-202ENST00000617456 SSX9Q7RTT3 188 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms