RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TEKQ02763 1124 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 HSF2Q03933 536 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 APOFQ13790 326 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 MEP1BQ16820 701 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 NRN1LQ496H8 165 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 LINC01590Q5TEZ4 76 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 FAM27BQ5VT28 67 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 AADACL4Q5VUY2 407 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 LYPD4Q6UWN0 246 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 B3GLCTQ6Y288 498 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF511Q8NB15 262 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR6K6Q8NGW6 343 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 RHOXF1Q8NHV9 184 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 FGFBP3Q8TAT2 258 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 TFAP2CQ92754 450 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 MUCL1Q96DR8 90 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 APOL4Q9BPW4 351 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 RASSF1Q9NS23 344 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 DNAJC27Q9NZQ0 273 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 MOKQ9UQ07 419 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC25A15Q9Y619 301 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 HLA-HP01893 362 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 THBDP07204 575 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 GAAP10253 952 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 CD79AP11912 226 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC2A5P22732 501 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 PEX19P40855 299 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 KIR2DL3P43628 341 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 IL5RAQ01344 420 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 PIGFQ07326 219 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 PPA1Q15181 289 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 KCNMB1Q16558 191 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF691Q5VV52 312 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 NXNL2Q5VZ03 156 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 MEX3BQ6ZN04 569 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 MEPCEQ7L2J0 689 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC16A14Q7RTX9 510 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 WFDC8Q8IUA0 241 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 CCDC36Q8IYA8 594 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ENTHD1Q8IYW4 607 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC26A10Q8NG04 563 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR10H5Q8NGA6 315 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZMYND19Q96E35 227 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 TEAD3Q99594 435 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF416Q9BWM5 594 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 C1QTNF6Q9BXI9 259 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 KCNN2Q9H2S1 579 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 MRPL22Q9NWU5 206 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF224Q9NZL3 707 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 AMDHD2Q9Y303 409 aa13.65□□□□□ -0.22
PCDHGC3-204ENST00000617222 ARPC4-TTLL3A0A0A6YYG9 625 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF503-AS2A6NEH8 195 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 CCDC182A6NF36 153 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 PRODHO43272 600 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 MPZL2O60487 215 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 WNT11O96014 354 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 CST2P09228 141 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 GNAO1P09471 354 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF823P16415 610 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 IGFBP2P18065 325 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 GABRB1P18505 474 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 GSTT1P30711 240 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 BLVRAP53004 296 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 IL18R1Q13478 541 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 ENDOGQ14249 297 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 SLC25A30Q5SVS4 291 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 SP5Q6BEB4 398 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 SETD9Q8NE22 299 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 FBXO17Q96EF6 278 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 PSMG3-AS1Q96PY0 264 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 RNF121Q9H920 327 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 OBP2BQ9NPH6 170 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 B3GNT2Q9NY97 397 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
PCDHGC3-204ENST00000617222 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 CASKO14936 926 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 ENTPD6O75354 484 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 UBL3O95164 117 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 HRGP04196 525 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 HSPA13P48723 471 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 CDH11P55287 796 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 ISL1P61371 349 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 LSM6P62312 80 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 RAB1AP62820 205 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 MAD2L1BPQ15013 274 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 OCLNQ16625 522 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 SLC36A2Q495M3 483 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 USP51Q70EK9 711 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 MDP1Q86V88 176 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 GID4Q8IVV7 300 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 C8orf59Q8N0T1 100 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 ACBD4Q8NC06 268 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 DACH2Q96NX9 599 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 CDADC1Q9BWV3 514 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 WDR76Q9H967 626 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms