RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 GPR52Q9Y2T5 361 aa13.01□□□□□ -0.33
UBXN1-218ENST00000616865 USF3Q68DE3 2245 aa13.01□□□□□ -0.33
UBXN1-218ENST00000616865 RNF223E7ERA6 249 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 H0YJX3 145 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 QDPRP09417 244 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 EPHA2P29317 976 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 CDKN2AP42771 156 aaKnown RBP13□□□□□ -0.33
UBXN1-218ENST00000616865 GUCA1AP43080 201 aaPredicted RBP13□□□□□ -0.33
UBXN1-218ENST00000616865 HSPA13P48723 471 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 CENPAP49450 140 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 ZNF84P51523 738 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 ROR2Q01974 943 aaKnown RBP13□□□□□ -0.33
UBXN1-218ENST00000616865 LGALS3BPQ08380 585 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 ETFDHQ16134 617 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 THEM4Q5T1C6 240 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 IZUMO2Q6UXV1 221 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 DEPDC4Q8N2C3 294 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 SLC37A3Q8NCC5 494 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 FAM81AQ8TBF8 368 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 TMEM54Q969K7 222 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 ALKBH3Q96Q83 286 aaPredicted RBP13□□□□□ -0.33
UBXN1-218ENST00000616865 SNX18Q96RF0 628 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 KCNK17Q96T54 332 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 APOL4Q9BPW4 351 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 GRIP2Q9C0E4 1043 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 ROS1P08922 2347 aa13□□□□□ -0.33
UBXN1-218ENST00000616865 LOC100130705A0A1B0GUX0 176 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 CIB4A0PJX0 185 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 SLC22A23A1A5C7 686 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 PRR23D1E9PI22 279 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 OVOL3O00110 214 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 SURF4O15260 269 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 SLC16A7O60669 478 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 UPK3AO75631 287 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 SLC2A10O95528 541 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 PRR23D2P0DMB1 279 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 CRABP1P29762 137 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 GGT2P36268 569 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 AQP4P55087 323 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 CRMP1Q14194 572 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 C9orf135Q5VTT2 229 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 C12orf73Q69YU5 71 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 Q6ZT83 130 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 PTCHD4Q6ZW05 846 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 WDFY1Q8IWB7 410 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 TCEANCQ8N8B7 351 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 CYB561A3Q8NBI2 242 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 STEAP2Q8NFT2 490 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 LILRB1Q8NHL6 650 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 NSMAFQ92636 917 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 FBXW5Q969U6 566 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 S100PBPQ96BU1 408 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 HRASLS5Q96KN8 279 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 MRPL13Q9BYD1 178 aaKnown RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 SYT4Q9H2B2 425 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 GPR35Q9HC97 309 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 SRA1Q9HD15 236 aaKnown RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 RPRD1BQ9NQG5 326 aaKnown RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 VSX1Q9NZR4 365 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 H2AFY2Q9P0M6 372 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-218ENST00000616865 RNF115Q9Y4L5 304 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 COL6A5A8TX70 2615 aa12.99□□□□□ -0.33
UBXN1-218ENST00000616865 DHHO43323 396 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 KHDRBS3O75525 346 aaKnown RBP12.98□□□□□ -0.33
UBXN1-218ENST00000616865 SOD3P08294 240 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 DANCRP0C864 163 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 EDNRAP25101 427 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 MPGP29372 298 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 CAPGP40121 348 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 FMODQ06828 376 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 CEACAM16Q2WEN9 425 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 NPEPL1Q8NDH3 523 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 SETD9Q8NE22 299 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 OR2T4Q8NH00 348 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 MCHR2Q969V1 340 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 TRMT61AQ96FX7 289 aaKnown RBP12.98□□□□□ -0.33
UBXN1-218ENST00000616865 IL4I1Q96RQ9 567 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 ADI1Q9BV57 179 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 FN3KQ9H479 309 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 MALT1Q9UDY8 824 aa12.98□□□□□ -0.33
UBXN1-218ENST00000616865 ATRQ13535 2644 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 A0A1W2PPL8 197 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 H0YAE9 185 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 DLGAP1O14490 977 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 SLC16A6O15403 523 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 TLX2O43763 284 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-218ENST00000616865 IL32P24001 234 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 CDKN1AP38936 164 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 SH3BGRP55822 239 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-218ENST00000616865 IL5RAQ01344 420 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 P2RY6Q15077 328 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 HIST3H3Q16695 136 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 PHYHD1Q5SRE7 291 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 NCMAPQ5T1S8 102 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 ALKBH2Q6NS38 261 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms