RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	C7orf66	A4D0T2	115 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR4C45	A6NMZ5	311 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	GPR171	O14626	319 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	TSPAN2	O60636	221 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	WNT11	O96014	354 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CTLA4	P16410	223 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SLC6A8	P48029	635 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PTH2R	P49190	550 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	P2RX1	P51575	399 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CBFB	Q13951	182 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	HACD4	Q5VWC8	232 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390		Q6ZTK2	550 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PLPP7	Q8NBV4	271 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	UXS1	Q8NBZ7	420 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR11G2	Q8NGC1	345 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR1N1	Q8NGS0	311 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF417	Q8TAU3	575 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZFP64	Q9NPA5	681 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	EIF3K	Q9UBQ5	218 aa	Known RBP	12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	B9D1	Q9UPM9	204 aa		12.52	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PNP	P00491	289 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	KIR3DL2	P43630	455 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR3A3	P47888	321 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SELENOP	P49908	381 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	EFNB2	P52799	333 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	FBXW4	P57775	412 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	C17orf82	Q86X59	251 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ADGRG3	Q86Y34	549 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	GPR148	Q8TDV2	347 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LIPH	Q8WWY8	451 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR2M2	Q96R28	347 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	TTYH1	Q9H313	450 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	METTL17	Q9H7H0	456 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZC4H2	Q9NQZ6	224 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CDV3	Q9UKY7	258 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CPED1	A4D0V7	1026 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ALG1L2	C9J202	215 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	GABARAP	H6UMI1	98 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF354A	O60765	605 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ANXA7	P20073	488 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MAPK3	P27361	379 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	RAD52	P43351	418 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	TAS2R20	P59543	309 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	GUCA2A	Q02747	115 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	COL28A1	Q2UY09	1125 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	C1orf140	Q5VVS0	124 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OGFOD3	Q6PK18	319 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SEZ6L2	Q6UXD5	910 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LIX1L	Q8IVB5	337 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR56B4	Q8NH76	319 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OTOS	Q8NHW6	89 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PTDSS2	Q9BVG9	487 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390	COPZ2	Q9P299	210 aa		12.51	□□□□□ -0.41
CACNA1C-231	ENST00000616390		A0A1B0GX78	115 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PRSS37	A4D1T9	235 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390		H3BML4	177 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	EIF1AY	O14602	144 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	GSTZ1	O43708	216 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	TXNDC12	O95881	172 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CD1A	P06126	327 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PSMB1	P20618	241 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	RPL27	P61353	136 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	INSM1	Q01101	510 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	FMOD	Q06828	376 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LINC00303	Q3SY05	128 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	FAM69A	Q5T7M9	428 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	GPR139	Q6DWJ6	353 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	BAIAP2L2	Q6UXY1	529 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LRRTM1	Q86UE6	522 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LINC00346	Q8IVM7	164 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR8S1	Q8NH09	359 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	NOX3	Q9HBY0	568 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	COA3	Q9Y2R0	106 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	NOS1AP	O75052	506 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	EIF2B1	Q14232	305 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	EMC4	Q5J8M3	183 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	FAM69B	Q5VUD6	431 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CD276	Q5ZPR3	534 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR8H3	Q8N146	312 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR2T35	Q8NGX2	323 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PHYHIP	Q92561	330 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	FSCN3	Q9NQT6	498 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MRPL22	Q9NWU5	206 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MED11	Q9P086	117 aa		12.5	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SDK2	Q58EX2	2172 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	KDM4B	O94953	1096 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	DNASE1	P24855	282 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	EIF1AX	P47813	144 aa	Known RBP	12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ARRB1	P49407	418 aa	Predicted RBP	12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF81	P51508	661 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	POLR2H	P52434	150 aa	Known RBP	12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MFGE8	Q08431	387 aa	Predicted RBP	12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	DYRK1A	Q13627	763 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR7A5	Q15622	319 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LRFN4	Q6PJG9	635 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF227	Q86WZ6	799 aa		12.49	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SLC38A9	Q8NBW4	561 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms