RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 STX18Q9P2W9 335 aaKnown RBP16.27■□□□□ 0.2
CDX1-202ENST00000616154 A0A1W2PRG6 482 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 BLOC1S5-TXNDC5H3BN57 136 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 H3BNX3 289 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 HAX1O00165 279 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 DHHO43323 396 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 PCMT1P22061 227 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 SRP14P37108 136 aaKnown RBP16.26■□□□□ 0.19
CDX1-202ENST00000616154 AQP2P41181 271 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 DAP3P51398 398 aaKnown RBP16.26■□□□□ 0.19
CDX1-202ENST00000616154 GALK2Q01415 458 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 RUNX1T1Q06455 604 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 MELKQ14680 651 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 TRAM2Q15035 370 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 TAF11Q15544 211 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 ANKDD1AQ495B1 522 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 ZFP1Q6P2D0 407 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 FKBP9P1Q75LS8 142 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 RNF113BQ8IZP6 322 aaKnown RBP16.26■□□□□ 0.19
CDX1-202ENST00000616154 BPIFA2Q96DR5 249 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 RSRC1Q96IZ7 334 aaKnown RBP16.26■□□□□ 0.19
CDX1-202ENST00000616154 SYT3Q9BQG1 590 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 INIPQ9NRY2 104 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 TMEM38BQ9NVV0 291 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 NDUFAF4Q9P032 175 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 RRP15Q9Y3B9 282 aaKnown RBP16.26■□□□□ 0.19
CDX1-202ENST00000616154 V9GYQ6 96 aa16.26■□□□□ 0.19
CDX1-202ENST00000616154 J3KTA2 159 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 MGRN1O60291 552 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 PIP5K1CO60331 668 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 IGHMP01871 453 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 HPXP02790 462 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 F13BP05160 661 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 ALDH3B1P43353 468 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 ERFP50548 548 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 PRKCDQ05655 676 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 FHL1Q13642 323 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 C10orf128Q5T292 105 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 ZNF584Q8IVC4 421 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 NOXO1Q8NFA2 376 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 MOSPD2Q8NHP6 518 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 ACOT11Q8WXI4 607 aaPredicted RBP16.25■□□□□ 0.19
CDX1-202ENST00000616154 FNDC11Q9BVV2 318 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 SMURF2Q9HAU4 748 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 ENPP4Q9Y6X5 453 aa16.25■□□□□ 0.19
CDX1-202ENST00000616154 A0A087WUU8 490 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 B4DSR2 109 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 FKBP6O75344 327 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 ACHEP22303 614 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 GPR6P46095 362 aaPredicted RBP16.24■□□□□ 0.19
CDX1-202ENST00000616154 RAB39AQ14964 217 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 DPPA2Q7Z7J5 298 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 LRP11Q86VZ4 500 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 ZDHHC21Q8IVQ6 265 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 SKA3Q8IX90 412 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 SLC22A24Q8N4F4 322 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 LRRC75AQ8NAA5 344 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 RDH5Q92781 318 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 MCHR2Q969V1 340 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 CHID1Q9BWS9 393 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 RACGAP1Q9H0H5 632 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 TXNIPQ9H3M7 391 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 MYEF2Q9P2K5 600 aaKnown RBP16.24■□□□□ 0.19
CDX1-202ENST00000616154 AP4S1Q9Y587 144 aa16.24■□□□□ 0.19
CDX1-202ENST00000616154 A0A1W2PRQ8 180 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 TRMUO75648 421 aaKnown RBP16.23■□□□□ 0.19
CDX1-202ENST00000616154 SERPINA5P05154 406 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 FABP3P05413 133 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 QDPRP09417 244 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 OR8G3PP0DMU2 310 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 IFI30P13284 250 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 ACADSP16219 412 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 ITGA2P17301 1181 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 MAKP20794 623 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 COL8A2P25067 703 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 YAP1P46937 504 aaKnown RBP16.23■□□□□ 0.19
CDX1-202ENST00000616154 SLC9A3P48764 834 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 MRPS11P82912 194 aaKnown RBP16.23■□□□□ 0.19
CDX1-202ENST00000616154 DGCR6Q14129 220 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 MAD2L1BPQ15013 274 aaPredicted RBP16.23■□□□□ 0.19
CDX1-202ENST00000616154 TMPRSS11FQ6ZWK6 438 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 MBOAT2Q6ZWT7 520 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 GLCCI1Q86VQ1 547 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 NRMQ8IXM6 262 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 CLDND2Q8NHS1 167 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 FGFBP3Q8TAT2 258 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 PYDC1Q8WXC3 89 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 DHRS1Q96LJ7 313 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 NMNAT1Q9HAN9 279 aaPredicted RBP16.23■□□□□ 0.19
CDX1-202ENST00000616154 S100A14Q9HCY8 104 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 ZNF346Q9UL40 294 aaKnown RBP16.23■□□□□ 0.19
CDX1-202ENST00000616154 AURKCQ9UQB9 309 aa16.23■□□□□ 0.19
CDX1-202ENST00000616154 MCIDASD6RGH6 385 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 PATE4P0C8F1 98 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 SAGP10523 405 aaPredicted RBP16.22■□□□□ 0.19
CDX1-202ENST00000616154 RHCEP18577 417 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 LAPTM4AQ15012 233 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 ALG10Q5BKT4 473 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 FAM205BPQ63HN1 556 aa16.22■□□□□ 0.19
CDX1-202ENST00000616154 YIPF5Q969M3 257 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms