RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, human

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-223	ENST00000613988	BLOC1S6	Q9UL45	172 aa		18.92	■□□□□ 0.62
CBWD1-223	ENST00000613988		A0A096LNT2	108 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988		A0A096LPE4	126 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988		A0A1W2PPZ6	126 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988		A8MV72	311 aa	Predicted RBP	18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	SLC25A16	P16260	332 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	ROR2	Q01974	943 aa	Known RBP	18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	C1D	Q13901	141 aa	Known RBP	18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	GINS1	Q14691	196 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	ANKDD1A	Q495B1	522 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	ANKRD16	Q6P6B7	361 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	MEX3D	Q86XN8	651 aa	Known RBP	18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	ENTHD1	Q8IYW4	607 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	OR52L1	Q8NGH7	329 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	TAAR8	Q969N4	342 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	ZNF566	Q969W8	418 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	OXGR1	Q96P68	337 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	EGLN3	Q9H6Z9	239 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	TBC1D23	Q9NUY8	699 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	SIGLEC7	Q9Y286	467 aa		18.91	■□□□□ 0.62
CBWD1-223	ENST00000613988	CUBN	O60494	3623 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	ARPC4-TTLL3	A0A0A6YYG9	625 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	PTP4A3	O75365	173 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	SLC43A1	O75387	559 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	OR7A10	O76100	309 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	F12	P00748	615 aa	Predicted RBP	18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	CRYAA	P02489	173 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	IGFBP1	P08833	259 aa	Predicted RBP	18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	CCDC159	P0C7I6	412 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	SH3BGR	P55822	239 aa	Predicted RBP	18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	SNRPG	P62308	76 aa	Known RBP	18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	TUBA1B	P68363	451 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	TUBA4A	P68366	448 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	LOXL1	Q08397	574 aa	Predicted RBP	18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	SWI5	Q1ZZU3	235 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	MST1L	Q2TV78	715 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	TMEM249	Q2WGJ8	235 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	FAM69A	Q5T7M9	428 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	TUBA1A	Q71U36	451 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	OAF	Q86UD1	273 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	FANK1	Q8TC84	345 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	KATNB1	Q9BVA0	655 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	PLA2G12A	Q9BZM1	189 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	RCE1	Q9Y256	329 aa		18.9	■□□□□ 0.62
CBWD1-223	ENST00000613988	RTTN	Q86VV8	2226 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	TRAV36DV7	A0A075B6V5	113 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988		M0R082	166 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	ZNF432	O94892	652 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	HOXB1	P14653	301 aa	Predicted RBP	18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	GRPR	P30550	384 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	ZBED5	Q49AG3	693 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	TMEM236	Q5W0B7	351 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	SMARCD3	Q6STE5	483 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	H1FNT	Q75WM6	255 aa	Predicted RBP	18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	OR2T33	Q8NG76	320 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	OR8J1	Q8NGP2	316 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	OR6S1	Q8NH40	331 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	ZNF417	Q8TAU3	575 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	C10orf105	Q8TEF2	133 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	ZNF587	Q96SQ5	575 aa	Predicted RBP	18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	TSSK6	Q9BXA6	273 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	OR52D1	Q9H346	318 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	B3GAT1	Q9P2W7	334 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	BAIAP2	Q9UQB8	552 aa		18.89	■□□□□ 0.61
CBWD1-223	ENST00000613988	ARFGEF3	Q5TH69	2177 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	RPL36A-HNRNPH2	H7BZ11	118 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	LY6H	O94772	140 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	HMGN1	P05114	100 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	CSF3	P09919	207 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	GABRB1	P18505	474 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	FUT1	P19526	365 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	SERPINF1	P36955	418 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	GABARAPL2	P60520	117 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	SNRPD2	P62316	118 aa	Known RBP	18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	ARF1	P84077	181 aa	Known RBP	18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	BLMH	Q13867	455 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	ZNF74	Q16587	644 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	TMEM154	Q6P9G4	183 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	PTCHD4	Q6ZW05	846 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	SLC46A3	Q7Z3Q1	461 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	GPR137C	Q8N3F9	429 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	ANKK1	Q8NFD2	765 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	OR8D4	Q8NGM9	314 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	OR13C2	Q8NGS9	318 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	NANOS1	Q8WY41	292 aa	Known RBP	18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	NELFA	Q9H3P2	528 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	MOV10	Q9HCE1	1003 aa	Known RBP	18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	CA10	Q9NS85	328 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	CRNN	Q9UBG3	495 aa	Predicted RBP	18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	MXRA5	Q9NR99	2828 aa		18.88	■□□□□ 0.61
CBWD1-223	ENST00000613988	FZD7	O75084	574 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	CH25H	O95992	272 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	MT-ATP6	P00846	226 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	CECR9	P0C854	216 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	CRHBP	P24387	322 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	NAAA	Q02083	359 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	C3orf36	Q3SXR2	165 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	SLC25A30	Q5SVS4	291 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	LAIR2	Q6ISS4	152 aa		18.87	■□□□□ 0.61
CBWD1-223	ENST00000613988	CXXC5	Q7LFL8	322 aa	Known RBP	18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms