RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SLC31A1O15431 190 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 TBC1D3HP0C7X1 549 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 RNH1P13489 461 aaKnown RBP20.19■□□□□ 0.82
SHANK2-220ENST00000608988 GLULP15104 373 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 RAB6AP20340 208 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 PBX2P40425 430 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 NR0B2Q15466 257 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 TAF13Q15543 124 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 TBC1D3CQ6IPX1 549 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 SLC18B1Q6NT16 456 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 TBC1D3Q8IZP1 549 aaPredicted RBP20.19■□□□□ 0.82
SHANK2-220ENST00000608988 INO80EQ8NBZ0 244 aaPredicted RBP20.19■□□□□ 0.82
SHANK2-220ENST00000608988 ULBP3Q9BZM4 244 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 TINAGL1Q9GZM7 467 aaPredicted RBP20.19■□□□□ 0.82
SHANK2-220ENST00000608988 MLXQ9UH92 298 aa20.19■□□□□ 0.82
SHANK2-220ENST00000608988 CARHSP1Q9Y2V2 147 aaKnown RBP20.19■□□□□ 0.82
SHANK2-220ENST00000608988 SULT2B1O00204 365 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 HLA-AP01891 365 aaKnown RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 GPR3P46089 330 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 LSSP48449 732 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 NAAAQ02083 359 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 RAB12Q6IQ22 244 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 ZNF627Q7L945 461 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 SPAG16Q8N0X2 631 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 MITD1Q8WV92 249 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 DGAT2Q96PD7 388 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 SEMA6CQ9H3T2 930 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 PRODH2Q9UF12 536 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 MSRAQ9UJ68 235 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 PCDHB10Q9UN67 800 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 DTX4Q9Y2E6 619 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 A0A1W2PPC1 479 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 PQLC2LA1A4F0 135 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 M0QYG6 137 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 F13BP05160 661 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 FCARP24071 287 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 SCRN3Q0VDG4 424 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 FUT7Q11130 342 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 ELOCQ15369 112 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 INPP5JQ15735 1006 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 PRAMEF17Q5VTA0 474 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 DHRS7BQ6IAN0 325 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 KCTD18Q6PI47 426 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 HAGHLQ6PII5 290 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 ZNF584Q8IVC4 421 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 OR13C8Q8NGS7 320 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 TRIM43Q96BQ3 446 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 ZNF75AQ96N20 296 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 CDC6Q99741 560 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 PRMT8Q9NR22 394 aaPredicted RBP20.18■□□□□ 0.82
SHANK2-220ENST00000608988 UBQLN4Q9NRR5 601 aa20.18■□□□□ 0.82
SHANK2-220ENST00000608988 BRCA2P51587 3418 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 GOLGA4Q13439 2230 aaKnown RBP20.17■□□□□ 0.82
SHANK2-220ENST00000608988 F8VVB4 439 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 F8VWA3 439 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 CBX5P45973 191 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 PRKXP51817 358 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 PGDP52209 483 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 PMPCAQ10713 525 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 SKP2Q13309 424 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 PNLIPRP3Q17RR3 467 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 SHISA5Q8N114 240 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 ZNF296Q8WUU4 475 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-220ENST00000608988 PPP1R1CQ8WVI7 109 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 PHB2Q99623 299 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 IFT22Q9H7X7 185 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 TMEM100Q9NV29 134 aa20.17■□□□□ 0.82
SHANK2-220ENST00000608988 TRBV23OR9-2A0A075B6M9 112 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 POM121BA6NF01 834 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 PVRP15151 417 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 GALNSP34059 522 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 PPICP45877 212 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 UBE2IP63279 158 aaKnown RBP20.16■□□□□ 0.82
SHANK2-220ENST00000608988 SERTAD2Q14140 314 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 MEP1BQ16820 701 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 PAPD4Q6PIY7 484 aaKnown RBP20.16■□□□□ 0.82
SHANK2-220ENST00000608988 ARHGEF39Q8N4T4 335 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 FOXRED1Q96CU9 486 aaPredicted RBP20.16■□□□□ 0.82
SHANK2-220ENST00000608988 CRISPLD2Q9H0B8 497 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 KCNG2Q9UJ96 466 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 OR2AT4A6NND4 320 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 F5H0A9 414 aaPredicted RBP20.16■□□□□ 0.82
SHANK2-220ENST00000608988 SLC25A12O75746 678 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 BDKRB2P30411 391 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 ARRB1P49407 418 aaPredicted RBP20.16■□□□□ 0.82
SHANK2-220ENST00000608988 DCDP81605 110 aaKnown RBP20.16■□□□□ 0.82
SHANK2-220ENST00000608988 EGR4Q05215 589 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 C1orf100Q5SVJ3 147 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 C3orf33Q6P1S2 294 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 NKAIN3Q8N8D7 197 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 OR1S2Q8NGQ3 325 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 OR9A4Q8NGU2 314 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 C16orf52Q8NHV5 167 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 CCL4L1Q8NHW4 92 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 ASB5Q8WWX0 329 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 ARL11Q969Q4 196 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 OR10A5Q9H207 317 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 S1PR5Q9H228 398 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 BIN3Q9NQY0 253 aa20.16■□□□□ 0.82
SHANK2-220ENST00000608988 CPNE7Q9UBL6 633 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms