RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SGCAQ16586 387 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.38■□□□□ 0.21
SSBP4-212ENST00000601919 ATCAYQ86WG3 371 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 C11orf40Q8WZ69 217 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 FCGR1BQ92637 280 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 FOXN4Q96NZ1 517 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 FOXB1Q99853 325 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 MND1Q9BWT6 205 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 TMEM38BQ9NVV0 291 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 MRPL22Q9NWU5 206 aaKnown RBP16.38■□□□□ 0.21
SSBP4-212ENST00000601919 SH3BGRL2Q9UJC5 107 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 LAMP5Q9UJQ1 280 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 POLR1DQ9Y2S0 133 aa16.38■□□□□ 0.21
SSBP4-212ENST00000601919 TRIM64CA6NLI5 447 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 TNFSF13O75888 250 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 TOXO94900 526 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 FARS2O95363 451 aaKnown RBP16.37■□□□□ 0.21
SSBP4-212ENST00000601919 GPANK1O95872 356 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 SPARCP09486 303 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 MPGP29372 298 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 ACTA2P62736 377 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 ACTG2P63267 376 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 TGFBR3Q03167 851 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 FOXF2Q12947 444 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 IRF3Q14653 427 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 SLC18B1Q6NT16 456 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 LYPD4Q6UWN0 246 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 TMPRSS11AQ6ZMR5 421 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 CDC20BQ86Y33 519 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 KLHL36Q8N4N3 616 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 OR2AJ1Q8NGZ0 328 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 OTOSQ8NHW6 89 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 ASB17Q8WXJ9 295 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 STARD4Q96DR4 205 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 KCNN2Q9H2S1 579 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 SIAEQ9HAT2 523 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 ERVK13-1Q9NX77 482 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 PRSS50Q9UI38 385 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 FREM1Q5H8C1 2179 aa16.37■□□□□ 0.21
SSBP4-212ENST00000601919 INTS1Q8N201 2190 aaKnown RBP16.36■□□□□ 0.21
SSBP4-212ENST00000601919 A0A1W2PQL4 384 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-212ENST00000601919 TMEM129A0AVI4 362 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 EIF4E1BA6NMX2 242 aaKnown RBP16.36■□□□□ 0.21
SSBP4-212ENST00000601919 MPZL1O95297 269 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 OR8G3PP0DMU2 310 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 CD8BP10966 210 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 CDAP32320 146 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 CAPZA2P47755 286 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 ETV1P50549 477 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 EMX1Q04741 257 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-212ENST00000601919 GALEQ14376 348 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 PCK2Q16822 640 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 FAM27BQ5VT28 67 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 VWA1Q6PCB0 445 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 Q6ZT83 130 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 KCTD8Q6ZWB6 473 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 LINGO2Q7L985 606 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 DPY19L4Q7Z388 723 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 BTLAQ7Z6A9 289 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 EGFL6Q8IUX8 553 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 RPRMLQ8N4K4 120 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 RND1Q92730 232 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 TBX5Q99593 518 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 WACQ9BTA9 647 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 ALG8Q9BVK2 526 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 PIGMQ9H3S5 423 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 ZNF629Q9UEG4 869 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-212ENST00000601919 OSGIN2Q9Y236 505 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 MEMO1Q9Y316 297 aa16.36■□□□□ 0.21
SSBP4-212ENST00000601919 LIMS3P0CW19 117 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 LIMS4P0CW20 117 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 EDNRAP25101 427 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 NR1H2P55055 460 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 PCBD1P61457 104 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 MEP1BQ16820 701 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 KCTD18Q6PI47 426 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-212ENST00000601919 ZNF813Q6ZN06 617 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 BEND4Q6ZU67 534 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 ZNF627Q7L945 461 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 LHFPL3Q86UP9 236 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 SLC22A24Q8N4F4 322 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 NANOGP1Q8N7R0 232 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 OR52N1Q8NH53 320 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 SNX33Q8WV41 574 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 RORBQ92753 470 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 ZNF837Q96EG3 531 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-212ENST00000601919 ACOT13Q9NPJ3 140 aa16.35■□□□□ 0.21
SSBP4-212ENST00000601919 CAB39Q9Y376 341 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-212ENST00000601919 CGAP01215 116 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 CST2P09228 141 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 ALOX5APP20292 161 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 PCMT1P22061 227 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 ARF1P84077 181 aaKnown RBP16.34■□□□□ 0.21
SSBP4-212ENST00000601919 EGR3Q06889 387 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 AQP6Q13520 282 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 EIF2B1Q14232 305 aaKnown RBP16.34■□□□□ 0.21
SSBP4-212ENST00000601919 PLEKHG7Q6ZR37 379 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 ZNF367Q7RTV3 350 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 KCTD20Q7Z5Y7 419 aa16.34■□□□□ 0.21
SSBP4-212ENST00000601919 DPPA2Q7Z7J5 298 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms