RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 REV1Q9UBZ9 1251 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 ADAM21Q9UKJ8 722 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 SIGLEC7Q9Y286 467 aa12.21□□□□□ -0.45
LIG1-218ENST00000599322 TRBV4-1A0A0J9YWV2 114 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 PRSS37A4D1T9 235 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 CDC42EP2O14613 210 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 KHDRBS3O75525 346 aaKnown RBP12.2□□□□□ -0.46
LIG1-218ENST00000599322 SNAP29O95721 258 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 RENP00797 406 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 ADRA2AP08913 450 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 FAM157BP0CG42 384 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 ZNF32P17041 273 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 STOMP27105 288 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 LAP3P28838 519 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 PCSK6P29122 969 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 CRABP1P29762 137 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 GCH1P30793 250 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 OMPP47874 163 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 CENPAP49450 140 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 ARHGDIAP52565 204 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 SCRN3Q0VDG4 424 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
LIG1-218ENST00000599322 TRIM25Q14258 630 aaKnown RBP12.2□□□□□ -0.46
LIG1-218ENST00000599322 NKPD1Q17RQ9 610 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 IQCCQ4KMZ1 466 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 SYT9Q86SS6 491 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 JAZF1Q86VZ6 243 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 DHRS1Q96LJ7 313 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 ZNF75AQ96N20 296 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 SLCO1C1Q9NYB5 712 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 NDRG4Q9ULP0 352 aaKnown RBP12.2□□□□□ -0.46
LIG1-218ENST00000599322 ADAM18Q9Y3Q7 739 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 IER3IP1Q9Y5U9 82 aa12.2□□□□□ -0.46
LIG1-218ENST00000599322 IGHV4-30-2A0A087WSY4 118 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 TEX13CA0A0J9YWL9 993 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 TNFRSF11BO00300 401 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 SOCS2O14508 198 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 TLX2O43763 284 aaPredicted RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 PTP4A3O75365 173 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 APEHP13798 732 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 DAOP14920 347 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 HOXB6P17509 224 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 USF1P22415 310 aaPredicted RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 APEX1P27695 318 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 UCP2P55851 309 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 KLF3P57682 345 aaPredicted RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 LOXL1Q08397 574 aaPredicted RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 RPL13AP3Q6NVV1 102 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 TMEM154Q6P9G4 183 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 PGM2L1Q6PCE3 622 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 DNM1P46Q6ZS02 220 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 TSEN54Q7Z6J9 526 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 MAPK1IP1LQ8NDC0 245 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 OR52L1Q8NGH7 329 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 FGFBP3Q8TAT2 258 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 FANK1Q8TC84 345 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 ERMAPQ96PL5 475 aaPredicted RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 GPX7Q96SL4 187 aaPredicted RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 SYT3Q9BQG1 590 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 IFT27Q9BW83 186 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 MRPL37Q9BZE1 423 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 C1orf21Q9H246 121 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 OR51B6Q9H340 312 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 MAGIXQ9H6Y5 334 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 ELOVL3Q9HB03 270 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 NRIP3Q9NQ35 241 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 POLR1DQ9Y2S0 133 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 UGT2A1Q9Y4X1 527 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
LIG1-218ENST00000599322 ANK3Q12955 4377 aaKnown RBP12.19□□□□□ -0.46
LIG1-218ENST00000599322 C5orf49A4QMS7 147 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 H7C1C5 153 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 IMPA2O14732 288 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 GPRIN2O60269 458 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 SLC16A7O60669 478 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 MMP7P09237 267 aaPredicted RBP12.18□□□□□ -0.46
LIG1-218ENST00000599322 CCL2P13500 99 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 FUT4P22083 530 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 FPR3P25089 353 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 LIMS1P48059 325 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 LCN6P62502 163 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 SEC23BQ15437 767 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 RFX4Q33E94 735 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 ZNF718Q3SXZ3 478 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 DNAL1Q4LDG9 190 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 RINLQ6ZS11 566 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 TRPM8Q7Z2W7 1104 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 ZNF584Q8IVC4 421 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 GLB1L2Q8IW92 636 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 OR1J1Q8NGS3 322 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 UBASH3BQ8TF42 649 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 NABP1Q96AH0 204 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 OR2H1Q9GZK4 316 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 REEP1Q9H902 201 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms