RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 BEX2Q9BXY8 128 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 BCL2L14Q9BZR8 327 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 NSRP1Q9H0G5 558 aaKnown RBP12.92□□□□□ -0.34
LIG1-215ENST00000597901 GORASP2Q9H8Y8 452 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 TAAR3PQ9P1P4 343 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 GRHPRQ9UBQ7 328 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 CDC42EP3Q9UKI2 254 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 TIMM10BQ9Y5J6 103 aa12.92□□□□□ -0.34
LIG1-215ENST00000597901 IGLV3-9A0A075B6K5 115 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 A0A1W2PPW3 197 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 TGFAP01135 160 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 CD14P08571 375 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 CST2P09228 141 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 ZNF16P17020 682 aaPredicted RBP12.91□□□□□ -0.34
LIG1-215ENST00000597901 ERVS71-1P61550 626 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 ALKBH6Q3KRA9 238 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 ALDH16A1Q8IZ83 802 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 FAM86B1Q8N7N1 296 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 FAM156AQ8NDB6 213 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 AKR7LQ8NHP1 331 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 RDH5Q92781 318 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 FAM46AQ96IP4 442 aaKnown RBP12.91□□□□□ -0.34
LIG1-215ENST00000597901 POM121L2Q96KW2 1035 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 Q96M85 177 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 SOX7Q9BT81 388 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 EIF3KQ9UBQ5 218 aaKnown RBP12.91□□□□□ -0.34
LIG1-215ENST00000597901 GPR160Q9UJ42 338 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 SAMD4AQ9UPU9 718 aaKnown RBP12.91□□□□□ -0.34
LIG1-215ENST00000597901 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 ADAM18Q9Y3Q7 739 aa12.91□□□□□ -0.34
LIG1-215ENST00000597901 C5orf49A4QMS7 147 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 AHCYL1O43865 530 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 DIRAS1O95057 198 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 SCG5P05408 212 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 FAM157CP0CG43 387 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
LIG1-215ENST00000597901 OMPP47874 163 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 GDI2P50395 445 aaKnown RBP12.9□□□□□ -0.34
LIG1-215ENST00000597901 CHN2P52757 468 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 KLF3P57682 345 aaPredicted RBP12.9□□□□□ -0.34
LIG1-215ENST00000597901 PCBD1P61457 104 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 GNGT1P63211 74 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 MOGQ16653 247 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 FAM166AQ6J272 317 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 OR1J1Q8NGS3 322 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 PYURFQ96I23 114 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 CDRT15Q96T59 188 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
LIG1-215ENST00000597901 OR2H1Q9GZK4 316 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 SHARPINQ9H0F6 387 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 WNT5BQ9H1J7 359 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 HINT3Q9NQE9 182 aaKnown RBP12.9□□□□□ -0.34
LIG1-215ENST00000597901 ARL8BQ9NVJ2 186 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 SLCO1C1Q9NYB5 712 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 KCNS2Q9ULS6 477 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 SIGLEC7Q9Y286 467 aa12.9□□□□□ -0.34
LIG1-215ENST00000597901 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
LIG1-215ENST00000597901 TRBV4-1A0A0J9YWV2 114 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 A0A1W2PPL8 197 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 RNF212BA8MTL3 300 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 C17orf100A8MU93 164 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 H7C1C5 153 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 NDUFB2O95178 105 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 HSD17B1P14061 328 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 IL2RGP31785 369 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 WNT5AP41221 380 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 MAGEB1P43366 347 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 LIMS1P48059 325 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 TMEM33P57088 247 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 LCN6P62502 163 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 ENDOGQ14249 297 aaKnown RBP12.89□□□□□ -0.35
LIG1-215ENST00000597901 KRT72Q14CN4 511 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 SEC23BQ15437 767 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 TRIP10Q15642 601 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 FGD3Q5JSP0 725 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 UGT2A3Q6UWM9 527 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 ICA1LQ8NDH6 482 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 OR52J3Q8NH60 311 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 HPS1Q92902 700 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 YIPF5Q969M3 257 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 LRRC37BQ96QE4 947 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 FUZQ9BT04 418 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 ZNF416Q9BWM5 594 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 CHODLQ9H9P2 273 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 POLE4Q9NR33 117 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 TAGLN3Q9UI15 199 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
LIG1-215ENST00000597901 PRSS37A4D1T9 235 aa12.88□□□□□ -0.35
LIG1-215ENST00000597901 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
LIG1-215ENST00000597901 XKRYO14609 159 aa12.88□□□□□ -0.35
LIG1-215ENST00000597901 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
LIG1-215ENST00000597901 ITGA2P17301 1181 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms