RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	OR4M2	Q8NGB6	313 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	SLC25A40	Q8TBP6	338 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	KLF14	Q8TD94	323 aa	Predicted RBP	8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	LIPH	Q8WWY8	451 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	CCL17	Q92583	94 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	LRRC58	Q96CX6	371 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	MARS2	Q96GW9	593 aa	Known RBP	8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	SLC6A7	Q99884	636 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	GAL3ST1	Q99999	423 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	ECSIT	Q9BQ95	431 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	OR2J1	Q9GZK6	312 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	WNT5B	Q9H1J7	359 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	KCNN2	Q9H2S1	579 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	TXNIP	Q9H3M7	391 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	SMURF2	Q9HAU4	748 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	BAG5	Q9UL15	447 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	MED31	Q9Y3C7	131 aa		8.94	□□□□□ -0.98
LSM4-205	ENST00000597776	PLSCR5	A0PG75	271 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	ISPD	A4D126	451 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	NPIPB13	A6NJU9	1138 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	HMGB1P1	B2RPK0	211 aa	Predicted RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	NPIPB4	C9JG80	1138 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	UBOX5	O94941	541 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	NGF	P01138	241 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	IGF2	P01344	180 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	VIM	P08670	466 aa	Known RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	LAP3	P28838	519 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	GCH1	P30793	250 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	HILS1	P60008	231 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	PPP1CB	P62140	327 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	LCN2	P80188	198 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	SF3A3	Q12874	501 aa	Known RBP eCLIP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	MOG	Q16653	247 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	LRRC23	Q53EV4	343 aa	Predicted RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	CYBRD1	Q53TN4	286 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	ALG10	Q5BKT4	473 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	FAM209A	Q5JX71	171 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	DCAF12L2	Q5VW00	463 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	MICU2	Q8IYU8	434 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	OR8J3	Q8NGG0	315 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	ABHD4	Q8TB40	342 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	GEMIN6	Q8WXD5	167 aa	Known RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	RAB1C	Q92928	201 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	GCDH	Q92947	438 aa	Predicted RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	ELMOD3	Q96FG2	381 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	TIMD4	Q96H15	378 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	TPD52L3	Q96J77	140 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	TMEM120A	Q9BXJ8	343 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	OR2H1	Q9GZK4	316 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	POLR2J2	Q9GZM3	115 aa	Known RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	POLR2J3	Q9H1A7	115 aa	Known RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	ESM1	Q9NQ30	184 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	DCAF16	Q9NXF7	216 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	UBAP1	Q9NZ09	502 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	STX18	Q9P2W9	335 aa	Known RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	EIF3K	Q9UBQ5	218 aa	Known RBP	8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	OPN4	Q9UHM6	478 aa		8.93	□□□□□ -0.98
LSM4-205	ENST00000597776	TRAV27	A0A087WT01	109 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776		A0A1W2PPL8	197 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776		H7C1C5	153 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	TRIM77	I1YAP6	450 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776		J3QLI3	93 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	MRAS	O14807	208 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	THRB	P10828	461 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	IFI30	P13284	250 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	YAP1	P46937	504 aa	Known RBP	8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	ARFIP2	P53365	341 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	CTXN1	P60606	82 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	RPL27	P61353	136 aa	Known RBP	8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	LCN6	P62502	163 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	ENDOG	Q14249	297 aa	Known RBP	8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	FAM27B	Q5VT28	67 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	MBNL2	Q5VZF2	373 aa	Known RBP	8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	METTL21C	Q5VZV1	264 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	ZNF774	Q6NX45	483 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	USP43	Q70EL4	1123 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	C3orf56	Q8N813	242 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	FAM216A	Q8WUB2	273 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	C10orf82	Q8WW14	230 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	C22orf15	Q8WYQ4	148 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	BPIFA2	Q96DR5	249 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	ZNF583	Q96ND8	569 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	SH3GL1	Q99961	368 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	ALG12	Q9BV10	488 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	POFUT1	Q9H488	388 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	MSL2	Q9HCI7	577 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	GMPR2	Q9P2T1	348 aa	Known RBP	8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	RHCG	Q9UBD6	479 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	A4GNT	Q9UNA3	340 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	HIF3A	Q9Y2N7	669 aa		8.92	□□□□□ -0.98
LSM4-205	ENST00000597776	TMEM89	A2RUT3	159 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	GMNC	A6NCL1	334 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776		J3KTA2	159 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	IFNA14	P01570	189 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	IGHM	P01871	453 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	SCG5	P05408	212 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	CST2	P09228	141 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	KDELR2	P33947	212 aa		8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	COMP	P49747	757 aa	Predicted RBP	8.91	□□□□□ -0.98
LSM4-205	ENST00000597776	ST3GAL3	Q11203	375 aa		8.91	□□□□□ -0.98

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