RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TGFBR3Q03167 851 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 SLC34A1Q06495 639 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 PPA1Q15181 289 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 TRIP10Q15642 601 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 MEP1BQ16820 701 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 PCK2Q16822 640 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 LRRC36Q1X8D7 754 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 NCMAPQ5T1S8 102 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 AADACL4Q5VUY2 407 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 B3GLCTQ6Y288 498 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 CPOQ8IVL8 374 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 C11orf40Q8WZ69 217 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 PITX2Q99697 317 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 ZNF416Q9BWM5 594 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 MARCH7Q9H992 704 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 EMC7Q9NPA0 242 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 FAM118AQ9NWS6 357 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 AASSQ9UDR5 926 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 NDRG3Q9UGV2 375 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 KLHL21Q9UJP4 597 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 PDZD2O15018 2839 aa9.2□□□□□ -0.94
LIG1-210ENST00000596332 SETXQ7Z333 2677 aaKnown RBP9.19□□□□□ -0.94
LIG1-210ENST00000596332 IGHV1-18A0A0C4DH31 117 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.19□□□□□ -0.94
LIG1-210ENST00000596332 CCDC182A6NF36 153 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 SLC16A6O15403 523 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 CST2P09228 141 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 OR8G3PP0DMU2 310 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 PEX19P40855 299 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 PSG4Q00888 419 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 PIGFQ07326 219 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 C1QTNF12Q5T7M4 302 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 MDP1Q86V88 176 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 WFDC8Q8IUA0 241 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 GLB1L2Q8IW92 636 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 LRRC18Q8N456 261 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 ZNF511Q8NB15 262 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 CPEB3Q8NE35 698 aaKnown RBP9.19□□□□□ -0.94
LIG1-210ENST00000596332 OR51L1Q8NGJ5 315 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 EME1Q96AY2 570 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 C14orf79Q96F83 325 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 LRRC46Q96FV0 321 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 MED18Q9BUE0 208 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 WNT5BQ9H1J7 359 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 OBP2BQ9NPH6 170 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 RASSF1Q9NS23 344 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 TVP23BQ9NYZ1 205 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 KIF17Q9P2E2 1029 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 AMDHD2Q9Y303 409 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 LHFPL6Q9Y693 200 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 ITPR2Q14571 2701 aa9.19□□□□□ -0.94
LIG1-210ENST00000596332 SHISA9B4DS77 424 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 ATP6V1G2O95670 118 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 RENP00797 406 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 HMGN1P05114 100 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 ZNF35P13682 527 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 COX6B1P14854 86 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 ZNF32P17041 273 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 NPR2P20594 1047 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 MSR1P21757 451 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 CRABP1P29762 137 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 CALCRP30988 508 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 LRBAP50851 2863 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 ZNF83P51522 516 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 ZNF84P51523 738 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 LSM6P62312 80 aaKnown RBP9.18□□□□□ -0.94
LIG1-210ENST00000596332 RAB1AP62820 205 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 HSF2Q03933 536 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 SPOCK1Q08629 439 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 SNAPC1Q16533 368 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 SGCAQ16586 387 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 C3orf36Q3SXR2 165 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 CCDC92Q53HC0 331 aaPredicted RBP9.18□□□□□ -0.94
LIG1-210ENST00000596332 LAIR2Q6ISS4 152 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 PLBD1Q6P4A8 553 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 JAZF1Q86VZ6 243 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 TIGD4Q8IY51 512 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 CCDC36Q8IYA8 594 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 GALNT4Q8N4A0 578 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 PAQR4Q8N4S7 273 aaPredicted RBP9.18□□□□□ -0.94
LIG1-210ENST00000596332 PACRGLQ8N7B6 248 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 TCEANCQ8N8B7 351 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 OR10S1Q8NGN2 331 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 NEUROG1Q92886 237 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 PLPPR2Q96GM1 343 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 TEAD3Q99594 435 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 NDEL1Q9GZM8 345 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 RIBC2Q9H4K1 309 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 PLEKHF2Q9H8W4 249 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 WDR76Q9H967 626 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 PNRC2Q9NPJ4 139 aaKnown RBP9.18□□□□□ -0.94
LIG1-210ENST00000596332 CYB5R1Q9UHQ9 305 aa9.18□□□□□ -0.94
LIG1-210ENST00000596332 LOC100509620A0A075B734 347 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 A0A1W2PPL8 197 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 TVP23AA6NH52 213 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 RIIAD1A6NNX1 92 aa9.17□□□□□ -0.94
LIG1-210ENST00000596332 TLX2O43763 284 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms