RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 DNAL1Q4LDG9 190 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 PABPC1L2AQ5JQF8 200 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 GPR139Q6DWJ6 353 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 OR2T5Q6IEZ7 315 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 TMEM53Q6P2H8 277 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 UGT2A3Q6UWM9 527 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF620Q6ZNG0 422 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 SLC30A7Q8NEW0 376 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 OR2T29Q8NH02 315 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 SAMD8Q96LT4 415 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 FOXN4Q96NZ1 517 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 SORCS2Q96PQ0 1159 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF416Q9BWM5 594 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 CADM1Q9BY67 442 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 PLA2G12AQ9BZM1 189 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 TRIM15Q9C019 465 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 SYT4Q9H2B2 425 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 RNF121Q9H920 327 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 POLE4Q9NR33 117 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 TMCC3Q9ULS5 477 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 LOC100509620A0A075B734 347 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 A0A1W2PPL8 197 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 AQP12BA6NM10 295 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 DCTN6O00399 190 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 XKRYO14609 159 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 ARPC3O15145 178 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 SNAP29O95721 258 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 GASTP01350 101 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 CST2P09228 141 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 RAP2AP10114 183 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 MSR1P21757 451 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 GLRXP35754 106 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 SNRPD2P62316 118 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 RAB35Q15286 201 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 FAM98BQ52LJ0 330 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 OTPQ5XKR4 325 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 ADCK1Q86TW2 530 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 BIVMQ86UB2 503 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 AQP12AQ8IXF9 295 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 SVOPLQ8N434 492 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 OR8D4Q8NGM9 314 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 AKR7LQ8NHP1 331 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 GNPDA2Q8TDQ7 276 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 CANT1Q8WVQ1 401 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 MRPL24Q96A35 216 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 LRGUKQ96M69 825 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 TSSK2Q96PF2 358 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 ERMAPQ96PL5 475 aaPredicted RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 DOK1Q99704 481 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 BDH2Q9BUT1 245 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 MRPL37Q9BZE1 423 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 OR2H1Q9GZK4 316 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 NDEL1Q9GZM8 345 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 WNT5BQ9H1J7 359 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 EGLN3Q9H6Z9 239 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 BARX1Q9HBU1 254 aaPredicted RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 EMC7Q9NPA0 242 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 MYEF2Q9P2K5 600 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 POMPQ9Y244 141 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 PMF1-BGLAPU3KQ54 211 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 U3KQV3 271 aa9.46□□□□□ -0.9
SHKBP1-206ENST00000595523 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 TANC2Q9HCD6 1990 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 IGHV4-30-2A0A087WSY4 118 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 A0A096LNT2 108 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 TCRBV3S1A0A5B6 114 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 DHRS12A0PJE2 317 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 GSC2O15499 205 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC16A7O60669 478 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 DNAJC8O75937 253 aaPredicted RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 CCNB2O95067 398 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 MPZL1O95297 269 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 GPANK1O95872 356 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 TP53P04637 393 aaPredicted RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 FAM157BP0CG42 384 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 HIST1H1CP16403 213 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC6A6P31641 620 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 IFNGR2P38484 337 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 PPOXP50336 477 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 RPS6KA3P51812 740 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 EFNA4P52798 201 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 NUDT6P53370 316 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 ERVS71-1P61550 626 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 KRTAP1-1Q07627 177 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 FLOT2Q14254 428 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 ZNF774Q6NX45 483 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 TMEM179BQ7Z7N9 219 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 LRP11Q86VZ4 500 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 ZCCHC24Q8N2G6 241 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 AQP11Q8NBQ7 271 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 MAPK1IP1LQ8NDC0 245 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 OR10H5Q8NGA6 315 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 POP5Q969H6 163 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 POM121L2Q96KW2 1035 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 NMNAT3Q96T66 252 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 IFT27Q9BW83 186 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms