RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZXDAP98168 799 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 SWI5Q1ZZU3 235 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 ZNF626Q68DY1 528 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 DBX2Q6ZNG2 339 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 SSX6Q7RTT6 188 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 SLC43A2Q8N370 569 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 ZNRF4Q8WWF5 429 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 THAP4Q8WY91 577 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 LAT2Q9GZY6 243 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 PRMT8Q9NR22 394 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 FLVCR2Q9UPI3 526 aa15.42■□□□□ 0.06
SHKBP1-205ENST00000594973 TEX46H3BTG2 121 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 TO15178 435 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 MAGEB4O15481 346 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 ARPC5O15511 151 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 GATCO43716 136 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 SSX5O60225 188 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 GDF9O60383 454 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 ATG12O94817 140 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 WISP1O95388 367 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 SMIM6P0DI80 62 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 MECP2P51608 486 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 OR12D2P58182 307 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 AP3S2P59780 193 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 RPS4XP62701 263 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 UQCC3Q6UW78 93 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 RPTNQ6XPR3 784 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 OR6S1Q8NH40 331 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 OR5W2Q8NH69 310 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 TGIF2Q9GZN2 237 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 HRASLSQ9HDD0 168 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 MMP25Q9NPA2 562 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 NRIP3Q9NQ35 241 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 TRIM36Q9NQ86 728 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 EDARQ9UNE0 448 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 NUP210LQ5VU65 1888 aa15.41■□□□□ 0.06
SHKBP1-205ENST00000594973 TRAV20A0A0B4J274 112 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 OR6C68A6NDL8 312 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 SIX6O95475 246 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 MT-ND5P03915 603 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 F13BP05160 661 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 OR10A3P58181 314 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 PRPS1P60891 318 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 RNF4P78317 190 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 E2F1Q01094 437 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ZNF85Q03923 595 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 LGALS3BPQ08380 585 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 RNASE12Q5GAN4 147 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 HAGHLQ6PII5 290 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ARL9Q6T311 187 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 MAML2Q8IZL2 1156 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 TEX19Q8NA77 164 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 BPIFCQ8NFQ6 507 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 DMBX1Q8NFW5 382 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 IFI44Q8TCB0 444 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 SFT2D1Q8WV19 159 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 OIT3Q8WWZ8 545 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 NARS2Q96I59 477 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 CMTM3Q96MX0 182 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 OR10A4Q9H209 315 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ZMIZ1Q9ULJ6 1067 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 FAM171A2A8MVW0 826 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ALG1L2C9J202 215 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 GDI2P50395 445 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 DCDP81605 110 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 LTBQ06643 244 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 SQSTM1Q13501 440 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 SFRP4Q6FHJ7 346 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ANKRD37Q7Z713 158 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 C12orf45Q8N5I9 185 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ZNF441Q8N8Z8 693 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 NPEPL1Q8NDH3 523 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 C7orf57Q8NEG2 295 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 OR6K6Q8NGW6 343 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 Q96M85 177 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ZNF251Q9BRH9 671 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 PDCD10Q9BUL8 212 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 INPP5EQ9NRR6 644 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 HAO2Q9NYQ3 351 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 ADAMTS9Q9P2N4 1935 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 BDP1A6H8Y1 2624 aa15.4■□□□□ 0.06
SHKBP1-205ENST00000594973 OR6C76A6NM76 312 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 RLN2P04090 185 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 PVALBP20472 110 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 CXCR1P25024 350 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 RAD52P43351 418 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC6A8P48029 635 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 PNLIPRP2P54317 469 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 DLX5P56178 289 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 GMFBP60983 142 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC3A1Q07837 685 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 PON3Q15166 354 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 ALG10Q5BKT4 473 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 LEG1Q6P5S2 330 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 CORO6Q6QEF8 472 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 APCDD1LQ8NCL9 501 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 TAAR8Q969N4 342 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 ARL5BQ96KC2 179 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 OCIAD1Q9NX40 245 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 ZNF69Q9UC07 566 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms