RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 B2RBV5 119 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 GPRIN2O60269 458 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 KRT36O76013 467 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF32P17041 273 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 CDAP32320 146 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 KRTAP1-1Q07627 177 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 SMARCD3Q6STE5 483 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 DPY19L2P2Q6ZN68 376 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 FAM122BQ7Z309 247 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 LINC00471Q8N535 108 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 MAPK1IP1LQ8NDC0 245 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 Q96M85 177 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 FUZQ9BT04 418 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 NRIP3Q9NQ35 241 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 SLCO1C1Q9NYB5 712 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 EIF3KQ9UBQ5 218 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 REV1Q9UBZ9 1251 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 PRPF19Q9UMS4 504 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 ADAM18Q9Y3Q7 739 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 TIMM10BQ9Y5J6 103 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 A0A096LNT2 108 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 IGKV1D-43A0A0B4J1Z2 117 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 A0A1W2PPW3 197 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 VWC2LB2RUY7 222 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 PTP4A3O75365 173 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 DIRAS1O95057 198 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 STAMBPO95630 424 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 MT-ND5P03915 603 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 ADRA2AP08913 450 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 DAOP14920 347 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 FPR3P25089 353 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 STOMP27105 288 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 LAP3P28838 519 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 GDI2P50395 445 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 KLF3P57682 345 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 SCRN3Q0VDG4 424 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 TMEM249Q2WGJ8 235 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 IQCCQ4KMZ1 466 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 MESTQ5EB52 335 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 DNM1P34Q6PK57 102 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 ARL9Q6T311 187 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 ZDHHC21Q8IVQ6 265 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 OR52J3Q8NH60 311 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 FANK1Q8TC84 345 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 SNX33Q8WV41 574 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 C11orf40Q8WZ69 217 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 NDRG4Q9ULP0 352 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 TLN2Q9Y4G6 2542 aa15.26■□□□□ 0.03
SHKBP1-204ENST00000594862 TEX13CA0A0J9YWL9 993 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 INAFM1C9JVW0 142 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 H3BSA7 217 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 IMPA2O14732 288 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 OR10H3O60404 316 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 LY6HO94772 140 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 TXNDC12O95881 172 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 LCKP06239 509 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 FAM157BP0CG42 384 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 GIFP27352 417 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 APEX1P27695 318 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 RRM2P31350 389 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 SLC6A6P31641 620 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 MSX2P35548 267 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 NR4A2P43354 598 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 UCP2P55851 309 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 SEC23BQ15437 767 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 CARTPTQ16568 116 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 RPL13AP3Q6NVV1 102 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 PGM2L1Q6PCE3 622 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 ZNF786Q8N393 782 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 SYNPRQ8TBG9 265 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 SYT3Q9BQG1 590 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 OR2H1Q9GZK4 316 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 MAGIXQ9H6Y5 334 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 POLE4Q9NR33 117 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 VSX1Q9NZR4 365 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 DUSP13Q9UII6 198 aa15.25■□□□□ 0.03
SHKBP1-204ENST00000594862 ZANQ9Y493 2812 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 IGLV3-9A0A075B6K5 115 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 ICMTO60725 284 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 KHDRBS3O75525 346 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 COX5BP10606 129 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 ZNF250P15622 560 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 ZNF26P17031 533 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 GZMKP49863 264 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 PSG4Q00888 419 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 NKPD1Q17RQ9 610 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 PCGF3Q3KNV8 242 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 LCN8Q6JVE9 175 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 DHFR2Q86XF0 187 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 GLB1L2Q8IW92 636 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 CLDN22Q8N7P3 220 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 UBASH3BQ8TF42 649 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 POM121L2Q96KW2 1035 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 SNX18Q96RF0 628 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 C1orf21Q9H246 121 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 ADAM21Q9UKJ8 722 aa15.24■□□□□ 0.03
SHKBP1-204ENST00000594862 RTTNQ86VV8 2226 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 H7C1C5 153 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 CCL2P13500 99 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 HOXB6P17509 224 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms