RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CCNB2O95067 398 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 H1F0P07305 194 aaKnown RBP17.31■□□□□ 0.36
LSM4-203ENST00000593829 PUDPQ08623 228 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 P2RY6Q15077 328 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 ZFP69Q49AA0 526 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 FBXW9Q5XUX1 488 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 STAC2Q6ZMT1 411 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 UBE2J2Q8N2K1 259 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 LINC01560Q8TB33 94 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 ACOT11Q8WXI4 607 aaPredicted RBP17.31■□□□□ 0.36
LSM4-203ENST00000593829 OR5M11Q96RB7 305 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 PIP5K1AQ99755 562 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 NDEL1Q9GZM8 345 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 SLC25A19Q9HC21 320 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 C20orf141Q9NUB4 165 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 CRIM1Q9NZV1 1036 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 LSM2Q9Y333 95 aaKnown RBP17.31■□□□□ 0.36
LSM4-203ENST00000593829 V9GYH0 126 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 CRYBG3Q68DQ2 2970 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 IQCMA0A1B0GVH7 501 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 A0A1W2PRQ8 180 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 CENPXA8MT69 81 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 OR6A2O95222 327 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 ADAP00813 363 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 ASAH2BP0C7U1 165 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 SNRPGP62308 76 aaKnown RBP17.31■□□□□ 0.36
LSM4-203ENST00000593829 ZNF730Q6ZMV8 503 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 NRARPQ7Z6K4 114 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 CXorf67Q86X51 503 aaPredicted RBP17.31■□□□□ 0.36
LSM4-203ENST00000593829 UEVLDQ8IX04 471 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 RNF113BQ8IZP6 322 aaKnown RBP17.31■□□□□ 0.36
LSM4-203ENST00000593829 LRRC17Q8N6Y2 441 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 FAM222BQ8WU58 562 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 OPALINQ96PE5 141 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 SSX4O60224 188 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 PIP5K1CO60331 668 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 OR7A10O76100 309 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 HSMCR30P0CW71 290 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 FUT1P19526 365 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 AHCYP23526 432 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 RFX2P48378 723 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 PTGES3Q15185 160 aaKnown RBP17.3■□□□□ 0.36
LSM4-203ENST00000593829 HDHD5Q9BXW7 423 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 SLA2Q9H6Q3 261 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 GPR52Q9Y2T5 361 aa17.3■□□□□ 0.36
LSM4-203ENST00000593829 A0A087WUU8 490 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 IGHV3-9P01782 118 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 IFI30P13284 250 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 PSMB1P20618 241 aaKnown RBP17.29■□□□□ 0.36
LSM4-203ENST00000593829 CCKARP32238 428 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 RORCP51449 518 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 CRISP1P54107 249 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 CLDN17P56750 224 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 MED22Q15528 200 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 VASH1Q7L8A9 365 aaPredicted RBP17.29■□□□□ 0.36
LSM4-203ENST00000593829 RRM2BQ7LG56 351 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 PXKQ7Z7A4 578 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 NRMQ8IXM6 262 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 OR8H2Q8N162 312 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 SLC7A13Q8TCU3 470 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 LIPHQ8WWY8 451 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 BPIFA2Q96DR5 249 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 SRRQ9GZT4 340 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 ERVK13-1Q9NX77 482 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 EPXP11678 715 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 SMIM11AP58511 58 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 LSM11P83369 360 aaKnown RBP eCLIP17.29■□□□□ 0.36
LSM4-203ENST00000593829 ASAH1Q13510 395 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 SFRP5Q5T4F7 317 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 NXNL2Q5VZ03 156 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 TMPRSS11AQ6ZMR5 421 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 MBOAT2Q6ZWT7 520 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 ZNF295-AS1Q8N0V1 137 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 KCNS3Q9BQ31 491 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 C14orf119Q9NWQ9 140 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 ASB6Q9NWX5 421 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 TAS2R5Q9NYW4 299 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 UPB1Q9UBR1 384 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 MALT1Q9UDY8 824 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 RCE1Q9Y256 329 aa17.29■□□□□ 0.36
LSM4-203ENST00000593829 SETXQ7Z333 2677 aaKnown RBP17.28■□□□□ 0.36
LSM4-203ENST00000593829 CELSR2Q9HCU4 2923 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 ZNF670-ZNF695F2Z2N8 137 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 TRAF3IP2O43734 574 aaPredicted RBP17.28■□□□□ 0.36
LSM4-203ENST00000593829 ADRA2AP08913 450 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 HLA-DOBP13765 273 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 POU3F1Q03052 451 aaPredicted RBP17.28■□□□□ 0.36
LSM4-203ENST00000593829 ZP4Q12836 540 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 ARMC4Q5T2S8 1044 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 NIPAL3Q6P499 406 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 CDK20Q8IZL9 346 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 POMGNT2Q8NAT1 580 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 STEAP2Q8NFT2 490 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 OR9Q2Q8NGE9 314 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 DHRS1Q96LJ7 313 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 WFIKKN1Q96NZ8 548 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 MED18Q9BUE0 208 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 OR10A4Q9H209 315 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 SLCO5A1Q9H2Y9 848 aa17.28■□□□□ 0.36
LSM4-203ENST00000593829 PKDREJQ9NTG1 2253 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms