RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 KLF9Q13886 244 aaPredicted RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 INPP5JQ15735 1006 aaPredicted RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 RNASE12Q5GAN4 147 aaKnown RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 OR7E24Q6IFN5 339 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 TMPRSS12Q86WS5 348 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 CATSPERDQ86XM0 798 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 SIAH3Q8IW03 269 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 DNAAF1Q8NEP3 725 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 M1APQ8TC57 530 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 TSEN15Q8WW01 171 aaKnown RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 AUNIPQ9H7T9 357 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 SLC22A13Q9Y226 551 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 RPH3AQ9Y2J0 694 aaPredicted RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 RALGAPA1Q6GYQ0 2036 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 TP53I11O14683 189 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 SRSF10O75494 262 aaKnown RBP17.61■□□□□ 0.41
CLIP3-206ENST00000593074 AQP8O94778 261 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 HRGP04196 525 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 CSRP1P21291 193 aaKnown RBP17.61■□□□□ 0.41
CLIP3-206ENST00000593074 FOLR3P41439 243 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 C19orf57Q0VDD7 668 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 DYRK1AQ13627 763 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 TMEM81Q6P7N7 255 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 PRSS45Q7RTY3 260 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 TCTE3Q8IZS6 198 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 WDSUB1Q8N9V3 476 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 MIB2Q96AX9 1013 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 HAVCR1Q96D42 359 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 DMRTB1Q96MA1 342 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 FAM210AQ96ND0 272 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 FRYLO94915 3013 aa17.61■□□□□ 0.41
CLIP3-206ENST00000593074 IGKV1D-43A0A0B4J1Z2 117 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 CELA2AP08217 269 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 FREM3P0C091 2139 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 ZNF823P16415 610 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 MNDAP41218 407 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 CCDC157Q569K6 752 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 TIGD3Q6B0B8 471 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 SYNPRQ8TBG9 265 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 ST7LQ8TDW4 575 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 FYTTD1Q96QD9 318 aaKnown RBP17.6■□□□□ 0.41
CLIP3-206ENST00000593074 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 DPAGT1Q9H3H5 408 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 FOXJ3Q9UPW0 622 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 LOXL2Q9Y4K0 774 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 TTLL8A6PVC2 850 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 SULT1B1O43704 296 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 KHDRBS3O75525 346 aaKnown RBP17.6■□□□□ 0.41
CLIP3-206ENST00000593074 MAS1P04201 325 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 GDNFP39905 211 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 PTH2RP49190 550 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 P2RY4P51582 365 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 RRAS2P62070 204 aaPredicted RBP17.6■□□□□ 0.41
CLIP3-206ENST00000593074 CD83Q01151 205 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 PLA2G2CQ5R387 149 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 LINGO2Q7L985 606 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 MDGA2Q7Z553 956 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 S100A16Q96FQ6 103 aaKnown RBP17.6■□□□□ 0.41
CLIP3-206ENST00000593074 RNF170Q96K19 258 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 COPZ2Q9P299 210 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 KLHL9Q9P2J3 617 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 PISDQ9UG56 409 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 STEAP1Q9UHE8 339 aa17.6■□□□□ 0.41
CLIP3-206ENST00000593074 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.59■□□□□ 0.41
CLIP3-206ENST00000593074 FAM47E-STBD1D6RA91 191 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 GABARAPH6UMI1 98 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 STK17BO94768 372 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 CD63P08962 238 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 ADH6P28332 368 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 ART1P52961 327 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 BIDP55957 195 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 OPN5Q6U736 354 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 ZNF227Q86WZ6 799 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 OR4K17Q8NGC6 315 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 SLC25A43Q8WUT9 341 aaPredicted RBP17.59■□□□□ 0.41
CLIP3-206ENST00000593074 BEX2Q9BXY8 128 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 MRPL13Q9BYD1 178 aaKnown RBP17.59■□□□□ 0.41
CLIP3-206ENST00000593074 NUDT15Q9NV35 164 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 PADI1Q9ULC6 663 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 NUBP2Q9Y5Y2 271 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 R4GMQ9 66 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 H3BSH0 61 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 IGHEP01854 428 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 EIF1P41567 113 aaKnown RBP17.59■□□□□ 0.41
CLIP3-206ENST00000593074 IFITM2Q01629 132 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 SLC22A10Q63ZE4 541 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 NDUFAF7Q7L592 441 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 DCXRQ7Z4W1 244 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 OR11G2Q8NGC1 345 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 TMEM185BQ9H7F4 350 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 PTGES2Q9H7Z7 377 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 GTF2A1LQ9UNN4 478 aa17.59■□□□□ 0.41
CLIP3-206ENST00000593074 RBMX2Q9Y388 322 aaKnown RBP17.59■□□□□ 0.41
CLIP3-206ENST00000593074 DMDP11532 3685 aa17.58■□□□□ 0.41
CLIP3-206ENST00000593074 COL27A1Q8IZC6 1860 aaPredicted RBP17.58■□□□□ 0.41
CLIP3-206ENST00000593074 NSG1A0A0A6YYJ2 146 aa17.58■□□□□ 0.4
CLIP3-206ENST00000593074 H0YC42 278 aa17.58■□□□□ 0.4
CLIP3-206ENST00000593074 TPPPO94811 219 aa17.58■□□□□ 0.4
CLIP3-206ENST00000593074 TCRBP04435 133 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms