RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 FAM157AC9JC47 383 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 RNF13O43567 381 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 PIP5K1CO60331 668 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 BCL10O95999 233 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 PTHP01270 115 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 MMP7P09237 267 aaPredicted RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 UMPSP11172 480 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 NAT2P11245 290 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 SRP14P37108 136 aaKnown RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 MNAT1P51948 309 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 UCP2P55851 309 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 SELENOVP59797 346 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 MAD2L1BPQ15013 274 aaPredicted RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 SLC36A2Q495M3 483 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 IFI44LQ53G44 452 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 RGS7BPQ6MZT1 257 aaPredicted RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 CBLL1Q75N03 491 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 TRPM8Q7Z2W7 1104 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 GLCCI1Q86VQ1 547 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 MEX3DQ86XN8 651 aaKnown RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 PAQR4Q8N4S7 273 aaPredicted RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 FAM86B1Q8N7N1 296 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 SLC30A7Q8NEW0 376 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 OR1J2Q8NGS2 313 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 PFN4Q8NHR9 129 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF519Q8TB69 540 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 ZFAND2BQ8WV99 257 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 MCHR2Q969V1 340 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 SH3GL3Q99963 347 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF416Q9BWM5 594 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 HINT3Q9NQE9 182 aaKnown RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF275Q9NSD4 429 aaPredicted RBP8.89□□□□□ -0.99
VPS4B-207ENST00000591519 NDE1Q9NXR1 346 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 SLCO1C1Q9NYB5 712 aa8.89□□□□□ -0.99
VPS4B-207ENST00000591519 WNT9BO14905 357 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 ARPC2O15144 300 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 NCR1O76036 304 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 UBOX5O94941 541 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 DIRAS1O95057 198 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 OR5F1O95221 314 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 IGHG1P01857 330 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 MT-ND1P03886 318 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 IFNW1P05000 195 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 MSMBP08118 114 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 T-ENOLP0DO92 83 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 GAAP10253 952 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 SAGP10523 405 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-207ENST00000591519 ANPEPP15144 967 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 FUT1P19526 365 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 FUT4P22083 530 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 CALB2P22676 271 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 RBM34P42696 430 aaKnown RBP8.88□□□□□ -0.99
VPS4B-207ENST00000591519 CRYBB2P43320 205 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 RAD52P43351 418 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 UGT2B15P54855 530 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 RUNX1T1Q06455 604 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 CCNIQ14094 377 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 MELKQ14680 651 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 MOGQ16653 247 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 PCGF3Q3KNV8 242 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 C10orf128Q5T292 105 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 TMEM53Q6P2H8 277 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 CYP2R1Q6VVX0 501 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 SLC16A14Q7RTX9 510 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 OR4K5Q8NGD3 323 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 SYNPRQ8TBG9 265 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 GEMIN6Q8WXD5 167 aaKnown RBP8.88□□□□□ -0.99
VPS4B-207ENST00000591519 C11orf40Q8WZ69 217 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 TMEM186Q96B77 213 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 FNDC11Q9BVV2 318 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 BCL2L14Q9BZR8 327 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 POLR2J2Q9GZM3 115 aaKnown RBP8.88□□□□□ -0.99
VPS4B-207ENST00000591519 POLR2J3Q9H1A7 115 aaKnown RBP8.88□□□□□ -0.99
VPS4B-207ENST00000591519 LRMDAQ9H2I8 198 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 SIAEQ9HAT2 523 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 TAAR3PQ9P1P4 343 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 CD300AQ9UGN4 299 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 RPS6KA6Q9UK32 745 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 FZR1Q9UM11 496 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 A4GNTQ9UNA3 340 aa8.88□□□□□ -0.99
VPS4B-207ENST00000591519 A0A1W2PPW3 197 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 A0A1W2PRG6 482 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 HTR3EA5X5Y0 456 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 NPIPB13A6NJU9 1138 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 NPIPB4C9JG80 1138 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 BLOC1S5-TXNDC5H3BN57 136 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 PPIHO43447 177 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 TRMUO75648 421 aaKnown RBP8.87□□□□□ -0.99
VPS4B-207ENST00000591519 CLPTM1O96005 669 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 IGHV3-13P01766 116 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 THRBP10828 461 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 CCL2P13500 99 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 HSD17B1P14061 328 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 ACADSP16219 412 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 ITGA2P17301 1181 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 IFNA8P32881 189 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 MAGEB1P43366 347 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF84P51523 738 aa8.87□□□□□ -0.99
VPS4B-207ENST00000591519 KLF3P57682 345 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms