RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 APEX1P27695 318 aaKnown RBP12.4□□□□□ -0.42
DDX39A-208ENST00000588692 KLF3P57682 345 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-208ENST00000588692 ERVK-25P63136 954 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 IQCCQ4KMZ1 466 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 GPR139Q6DWJ6 353 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 UNQ6126/PRO20091Q6UXV3 157 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 PRIMA1Q86XR5 153 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 HIPK1Q86Z02 1210 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 MCUR1Q96AQ8 359 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 CDRT15Q96T59 188 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 WACQ9BTA9 647 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 TPK1Q9H3S4 243 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 ARL8BQ9NVJ2 186 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 CD300AQ9UGN4 299 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 SIGLEC7Q9Y286 467 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 ADAM18Q9Y3Q7 739 aa12.4□□□□□ -0.42
DDX39A-208ENST00000588692 IGLV3-9A0A075B6K5 115 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 A0A1W2PPL8 197 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 ARPC2O15144 300 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 LCKP06239 509 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF23P17027 643 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF26P17031 533 aaPredicted RBP12.4□□□□□ -0.43
DDX39A-208ENST00000588692 LAP3P28838 519 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 ALDH3B1P43353 468 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 OMPP47874 163 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 UCP2P55851 309 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 MXRA7P84157 204 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 MESTQ5EB52 335 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 SYT9Q86SS6 491 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 LRP11Q86VZ4 500 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.43
DDX39A-208ENST00000588692 SYNPRQ8TBG9 265 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 C11orf40Q8WZ69 217 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 RSRC1Q96IZ7 334 aaKnown RBP12.4□□□□□ -0.43
DDX39A-208ENST00000588692 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 Q96M85 177 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 OR2H1Q9GZK4 316 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 NRIP3Q9NQ35 241 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 SLCO1C1Q9NYB5 712 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 MYEF2Q9P2K5 600 aaKnown RBP12.4□□□□□ -0.43
DDX39A-208ENST00000588692 ADAM21Q9UKJ8 722 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 FZR1Q9UM11 496 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 AURKCQ9UQB9 309 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 TIMM10BQ9Y5J6 103 aa12.4□□□□□ -0.43
DDX39A-208ENST00000588692 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 TRBV4-1A0A0J9YWV2 114 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 PRSS37A4D1T9 235 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 H7C1C5 153 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 ICMTO60725 284 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 PTP4A3O75365 173 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 DIRAS1O95057 198 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 TACSTD2P09758 323 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF16P17020 682 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-208ENST00000588692 SDHAP31040 664 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 GDI2P50395 445 aaKnown RBP12.39□□□□□ -0.43
DDX39A-208ENST00000588692 LCN6P62502 163 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 PSG4Q00888 419 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
DDX39A-208ENST00000588692 MAD2L1BPQ15013 274 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-208ENST00000588692 MOGQ16653 247 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 CHRFAM7AQ494W8 412 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 ADCK1Q86TW2 530 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 DEFB107AQ8IZN7 70 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 SNX33Q8WV41 574 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 FUZQ9BT04 418 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 OR51B6Q9H340 312 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 POLE4Q9NR33 117 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
DDX39A-208ENST00000588692 CDC42EP3Q9UKI2 254 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 V9GYQ6 96 aa12.39□□□□□ -0.43
DDX39A-208ENST00000588692 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.38□□□□□ -0.431e-10■■■■■ 34.4
DDX39A-208ENST00000588692 TEX13CA0A0J9YWL9 993 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 UNC119BA6NIH7 251 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 GADD45GO95257 159 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 MT-ND5P03915 603 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 FABP3P05413 133 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 CCNOP22674 350 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 CHN2P52757 468 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 MRPS11P82912 194 aaKnown RBP12.38□□□□□ -0.43
DDX39A-208ENST00000588692 SPIBQ01892 262 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 RIN1Q13671 783 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 SEC23BQ15437 767 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 DPY19L2P2Q6ZN68 376 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 OR1J1Q8NGS3 322 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 OR52J3Q8NH60 311 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 HPS1Q92902 700 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF416Q9BWM5 594 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 CHODLQ9H9P2 273 aa12.38□□□□□ -0.43
DDX39A-208ENST00000588692 NDRG4Q9ULP0 352 aaKnown RBP12.38□□□□□ -0.43
DDX39A-208ENST00000588692 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms