RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 OR1J2Q8NGS2 313 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 ERMAPQ96PL5 475 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-207ENST00000587256 VRK1Q99986 396 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-207ENST00000587256 BTBD10Q9BSF8 475 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 LRMDAQ9H2I8 198 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 OR51B6Q9H340 312 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 SAMHD1Q9Y3Z3 626 aaKnown RBP12.8□□□□□ -0.36
ATG4D-207ENST00000587256 CMAHPQ9Y471 501 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 DHRS12A0PJE2 317 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 ACOT8O14734 319 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 SLC16A7O60669 478 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 DNAJC8O75937 253 aaPredicted RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 CST2P09228 141 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 FAM157BP0CG42 384 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 CCL2P13500 99 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 APEHP13798 732 aaKnown RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 CTLA4P16410 223 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 CCNOP22674 350 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 APEX1P27695 318 aaKnown RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 NOS3P29474 1203 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 GSSP48637 474 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 PPOXP50336 477 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 EFNA4P52798 201 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 PCBD1P61457 104 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 PPP1R8Q12972 351 aaKnown RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 MST1LQ2TV78 715 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 RFX4Q33E94 735 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 OR2T5Q6IEZ7 315 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 DNM1P34Q6PK57 102 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF620Q6ZNG0 422 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 FOXL2NBQ6ZUU3 175 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 SPATA24Q86W54 205 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 ICA1LQ8NDH6 482 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 OR4C15Q8NGM1 316 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 OR2T29Q8NH02 315 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 MRPL24Q96A35 216 aaKnown RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 SLC7A6OSQ96CW6 309 aaPredicted RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 SAMD8Q96LT4 415 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 SORCS2Q96PQ0 1159 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 SMR3AQ99954 134 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 EMC7Q9NPA0 242 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 POLE4Q9NR33 117 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 FBXO9Q9UK97 447 aaPredicted RBP12.79□□□□□ -0.36
ATG4D-207ENST00000587256 CDH10Q9Y6N8 788 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 U3KQV3 271 aa12.79□□□□□ -0.36
ATG4D-207ENST00000587256 AQP12BA6NM10 295 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 C12orf71A8MTZ7 269 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 FAM171A2A8MVW0 826 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 RNF223E7ERA6 249 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 KHDRBS3O75525 346 aaKnown RBP12.78□□□□□ -0.36
ATG4D-207ENST00000587256 SNAP29O95721 258 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 TXNDC12O95881 172 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 ERCC1P07992 297 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-207ENST00000587256 GLRXP35754 106 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 HMGA2P52926 109 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 CLEC12AQ5QGZ9 265 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 RPL13AP3Q6NVV1 102 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 LEG1Q6P5S2 330 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 CLEC9AQ6UXN8 241 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 AQP12AQ8IXF9 295 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF525Q8N782 197 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 AQP11Q8NBQ7 271 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 AKR7LQ8NHP1 331 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF416Q9BWM5 594 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
ATG4D-207ENST00000587256 OR2H1Q9GZK4 316 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 EGLN3Q9H6Z9 239 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 VNN3Q9NY84 501 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 POLR1DQ9Y2S0 133 aa12.78□□□□□ -0.36
ATG4D-207ENST00000587256 A0A1W2PPW3 197 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 IMPA2O14732 288 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 LY6HO94772 140 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 RENP00797 406 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 CST1P01037 141 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 LCKP06239 509 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 CSF3P09919 207 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 STOMP27105 288 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 CENPAP49450 140 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 GDI2P50395 445 aaKnown RBP12.77□□□□□ -0.37
ATG4D-207ENST00000587256 DSCR9P59020 149 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 PSG4Q00888 419 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 SCRN3Q0VDG4 424 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 ENDOGQ14249 297 aaKnown RBP12.77□□□□□ -0.37
ATG4D-207ENST00000587256 RGS7BPQ6MZT1 257 aaPredicted RBP12.77□□□□□ -0.37
ATG4D-207ENST00000587256 PGM2L1Q6PCE3 622 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 GLB1L2Q8IW92 636 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 ALDH16A1Q8IZ83 802 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 CPEB3Q8NE35 698 aaKnown RBP12.77□□□□□ -0.37
ATG4D-207ENST00000587256 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 CANT1Q8WVQ1 401 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 RHNO1Q9BSD3 238 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 CHID1Q9BWS9 393 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 NUAK2Q9H093 628 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms