RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 BCL10O95999 233 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 IGHV1-46P01743 117 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 ASAH2BP0C7U1 165 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 UMPSP11172 480 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 TNFRSF1BP20333 461 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 CD247P20963 164 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 ZFP36P26651 326 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 PCGF2P35227 344 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 WNT5AP41221 380 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 RAD52P43351 418 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 CRYBA2P53672 197 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 HIST3H3Q16695 136 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 PABPC1L2AQ5JQF8 200 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 SAMD4BQ5PRF9 694 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 DCAF12L2Q5VW00 463 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 USP43Q70EL4 1123 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 NKAIN4Q8IVV8 208 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 RBM15BQ8NDT2 890 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 BHLHE22Q8NFJ8 381 aaPredicted RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 OR2T12Q8NG77 320 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 AKR7LQ8NHP1 331 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 MOSPD2Q8NHP6 518 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 PFN4Q8NHR9 129 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 CCL17Q92583 94 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 TAMM41Q96BW9 452 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 ZNF583Q96ND8 569 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 MRPL13Q9BYD1 178 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 C7orf69Q9H7B7 122 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 EVA1AQ9H8M9 152 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 MMP26Q9NRE1 261 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 DECR2Q9NUI1 292 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 NKIRAS2Q9NYR9 191 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 FBXL3Q9UKT7 428 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 PRPF19Q9UMS4 504 aaKnown RBP9.86□□□□□ -0.83
LIG3-207ENST00000586119 TANC2Q9HCD6 1990 aa9.86□□□□□ -0.83
LIG3-207ENST00000586119 CMYA5Q8N3K9 4069 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 A0A0G2JMP0 313 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 A0A0X1KG70 313 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SLC22A23A1A5C7 686 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ELOVL7A1L3X0 281 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ZSCAN5BA6NJL1 495 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 NME4O00746 187 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 FMO6PO60774 539 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 FARS2O95363 451 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 NGFP01138 241 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 IFNA14P01570 189 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 IGHV3-13P01766 116 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 HIST1H2ABP04908 130 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ANPEPP15144 967 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ZNF32P17041 273 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 FUT1P19526 365 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 AQP2P41181 271 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ZNF81P51508 661 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 MMP15P51511 669 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 UGT2B15P54855 530 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 CLRN1P58418 232 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SELENOVP59797 346 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 LIPEQ05469 1076 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 FMODQ06828 376 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 RPL18Q07020 188 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 LAPTM4AQ15012 233 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 TBC1D28Q2M2D7 210 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SLC36A2Q495M3 483 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 DNAL1Q4LDG9 190 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 CCDC80Q76M96 950 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 HIST3H2AQ7L7L0 130 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 PATL1Q86TB9 770 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 MICU2Q8IYU8 434 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 DEFB107AQ8IZN7 70 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 BCL6BQ8N143 479 aaPredicted RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 CLDN22Q8N7P3 220 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 OR4M2Q8NGB6 313 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SGMS2Q8NHU3 365 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SLC25A40Q8TBP6 338 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SNX33Q8WV41 574 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 IPCEF1Q8WWN9 437 aaPredicted RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 GEMIN6Q8WXD5 167 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 ASB10Q8WXI3 467 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 NSMAFQ92636 917 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 HDAC2Q92769 488 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 HIST1H2ACQ93077 130 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 NABP1Q96AH0 204 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 MARS2Q96GW9 593 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 POM121L2Q96KW2 1035 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 DCLRE1CQ96SD1 692 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 RBM4Q9BWF3 364 aaKnown RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 C20orf141Q9NUB4 165 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SLCO1C1Q9NYB5 712 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 TAS2R1Q9NYW7 299 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 UBAP1Q9NZ09 502 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ADA2Q9NZK5 511 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 ZNF229Q9UJW7 825 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 UGT2A1Q9Y4X1 527 aa9.85□□□□□ -0.83
LIG3-207ENST00000586119 SOX21Q9Y651 276 aaPredicted RBP9.85□□□□□ -0.83
LIG3-207ENST00000586119 IQCMA0A1B0GVH7 501 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 TRAPPC13A5PLN9 417 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 CLDN25C9JDP6 229 aa9.84□□□□□ -0.83
LIG3-207ENST00000586119 GYG2O15488 501 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms