RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 LRRC75AQ8NAA5 344 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FAM156AQ8NDB6 213 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 ICA1LQ8NDH6 482 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 ZNF519Q8TB69 540 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 SNX33Q8WV41 574 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 NMD3Q96D46 503 aaKnown RBP10.65□□□□□ -0.7
SS18-225ENST00000585121 PYURFQ96I23 114 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FAM46AQ96IP4 442 aaKnown RBP10.65□□□□□ -0.7
SS18-225ENST00000585121 C7orf34Q96L11 122 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 NSMCE2Q96MF7 247 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 CDRT15Q96T59 188 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 TPK1Q9H3S4 243 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 FZR1Q9UM11 496 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 UGT2A1Q9Y4X1 527 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 TIMM10BQ9Y5J6 103 aa10.65□□□□□ -0.7
SS18-225ENST00000585121 IGKV1D-43A0A0B4J1Z2 117 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 A0A1W2PPL8 197 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 VWC2LB2RUY7 222 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 NDUFB2O95178 105 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 CST2P09228 141 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 MMP7P09237 267 aaPredicted RBP10.64□□□□□ -0.71
SS18-225ENST00000585121 CCL2P13500 99 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 ZNF32P17041 273 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 STOMP27105 288 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 APEX1P27695 318 aaKnown RBP10.64□□□□□ -0.71
SS18-225ENST00000585121 ALDH3B1P43353 468 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 GDI2P50395 445 aaKnown RBP10.64□□□□□ -0.71
SS18-225ENST00000585121 KLF3P57682 345 aaPredicted RBP10.64□□□□□ -0.71
SS18-225ENST00000585121 GPR139Q6DWJ6 353 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 ZNF786Q8N393 782 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 SYNPRQ8TBG9 265 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 NABP1Q96AH0 204 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 ZNF570Q96NI8 536 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 OR51B6Q9H340 312 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 ARL8BQ9NVJ2 186 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 SLCO1C1Q9NYB5 712 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 TAAR3PQ9P1P4 343 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 V9GYQ6 96 aa10.64□□□□□ -0.71
SS18-225ENST00000585121 TRBV4-1A0A0J9YWV2 114 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 UNC119BA6NIH7 251 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CDC42EP2O14613 210 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 DNAJC8O75937 253 aaPredicted RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 IFNA2P01563 188 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 MT-ND5P03915 603 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 MSR1P21757 451 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 GIFP27352 417 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 LAP3P28838 519 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 SPIBQ01892 262 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 FHL1Q13642 323 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CHRFAM7AQ494W8 412 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 TMEM154Q6P9G4 183 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 TSEN54Q7Z6J9 526 aaKnown RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 HIPK1Q86Z02 1210 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 C1orf174Q8IYL3 243 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 DEFB107AQ8IZN7 70 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 PAQR4Q8N4S7 273 aaPredicted RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 CLDN22Q8N7P3 220 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 OR52J3Q8NH60 311 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 RSRC1Q96IZ7 334 aaKnown RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 Q96M85 177 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 WACQ9BTA9 647 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 PRSS37A4D1T9 235 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 H7C1C5 153 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ARPC2O15144 300 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 PTP4A3O75365 173 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 DIRAS1O95057 198 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 GADD45GO95257 159 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 FABP3P05413 133 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ZNF250P15622 560 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ZNF23P17027 643 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 GCH1P30793 250 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 IFNGR2P38484 337 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 RPS6KA3P51812 740 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CHN2P52757 468 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 LCN6P62502 163 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 PSG4Q00888 419 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 MAD2L1BPQ15013 274 aaPredicted RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 MSMPQ1L6U9 139 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ZNF718Q3SXZ3 478 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ARL9Q6T311 187 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ASRGL1Q7L266 308 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 SYT9Q86SS6 491 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 FAM86B1Q8N7N1 296 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CPEB3Q8NE35 698 aaKnown RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 OR1J1Q8NGS3 322 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 AKR7LQ8NHP1 331 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 RDH5Q92781 318 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 SLC7A6OSQ96CW6 309 aaPredicted RBP10.63□□□□□ -0.71
SS18-225ENST00000585121 DHRS1Q96LJ7 313 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 OR2H1Q9GZK4 316 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 C1orf21Q9H246 121 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 LPAR3Q9UBY5 353 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CD300AQ9UGN4 299 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CDC42EP3Q9UKI2 254 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 TMCC3Q9ULS5 477 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms