RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	RINL	Q6ZS11	566 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	FAM168A	Q92567	244 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	RASD2	Q96D21	266 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	RBP7	Q96R05	134 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	VRK1	Q99986	396 aa	Predicted RBP	11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	MRPL37	Q9BZE1	423 aa	Known RBP	11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	RNF121	Q9H920	327 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	NRIP3	Q9NQ35	241 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	GRHPR	Q9UBQ7	328 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	CMAHP	Q9Y471	501 aa		11.45	□□□□□ -0.58
SREBF1-223	ENST00000584760	TEX13C	A0A0J9YWL9	993 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	SLC22A23	A1A5C7	686 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	PRSS37	A4D1T9	235 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	VSTM5	A8MXK1	200 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	HAX1	O00165	279 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	AHCYL1	O43865	530 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	PTH	P01270	115 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	CCL2	P13500	99 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	SLC25A16	P16260	332 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	LAP3	P28838	519 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	SDHA	P31040	664 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	RRM2	P31350	389 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	MAGEA2	P43356	314 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	EVX1	P49640	407 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	RPS23	P62266	143 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	ENDOG	Q14249	297 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	TBC1D28	Q2M2D7	210 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	KRTAP24-1	Q3LI83	254 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	GPR139	Q6DWJ6	353 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZER1	Q7Z7L7	766 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZDHHC21	Q8IVQ6	265 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	CPEB3	Q8NE35	698 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	MUC13	Q9H3R2	512 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	CDH20	Q9HBT6	801 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	MYEF2	Q9P2K5	600 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	IL20RA	Q9UHF4	553 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	PRPF19	Q9UMS4	504 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	AURKC	Q9UQB9	309 aa		11.44	□□□□□ -0.58
SREBF1-223	ENST00000584760	IQCM	A0A1B0GVH7	501 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760		A0A1W2PPL8	197 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	UNC119B	A6NIH7	251 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	VWC2L	B2RUY7	222 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	XKRY	O14609	159 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	TXNDC12	O95881	172 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	CST2	P09228	141 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	FAM157B	P0CG42	384 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	APEH	P13798	732 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	CTLA4	P16410	223 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	MSR1	P21757	451 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	FPR3	P25089	353 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	APEX1	P27695	318 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	HSF2	Q03933	536 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	PLP2	Q04941	152 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	LOXL1	Q08397	574 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	SGCA	Q16586	387 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	PTCHD4	Q6ZW05	846 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	ADCK1	Q86TW2	530 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	LRP11	Q86VZ4	500 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR1J2	Q8NGS2	313 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	AKR7L	Q8NHP1	331 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	FANK1	Q8TC84	345 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	SYT3	Q9BQG1	590 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	BEX2	Q9BXY8	128 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	RAB1B	Q9H0U4	201 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	KCNN2	Q9H2S1	579 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	DYNLRB1	Q9NP97	96 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	CCNB1IP1	Q9NPC3	277 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	POLE4	Q9NR33	117 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	VSX1	Q9NZR4	365 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	CDC42EP3	Q9UKI2	254 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760	FZR1	Q9UM11	496 aa		11.43	□□□□□ -0.58
SREBF1-223	ENST00000584760		M0R233	179 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	NDUFS8	O00217	210 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	SOCS2	O14508	198 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	IMPA2	O14732	288 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	SYNGR3	O43761	229 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR10H3	O60404	316 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	SCG5	P05408	212 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	STOM	P27105	288 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	APLNR	P35414	380 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	GSS	P48637	474 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	PDLIM4	P50479	330 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	HMGA2	P52926	109 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	ERVS71-1	P61550	626 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	PSG4	Q00888	419 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	MS4A2	Q01362	244 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	TRIM25	Q14258	630 aa	Known RBP	11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	C6orf52	Q5T4I8	152 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	C1orf94	Q6P1W5	598 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	PGBD2	Q6P3X8	592 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	SMARCD3	Q6STE5	483 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	DPY19L2P2	Q6ZN68	376 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	POM121L2	Q96KW2	1035 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZNF416	Q9BWM5	594 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR2H1	Q9GZK4	316 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	WNT5B	Q9H1J7	359 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	C1orf21	Q9H246	121 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms