RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 DAG1Q14118 895 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 TRIM25Q14258 630 aaKnown RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 AVPI1Q5T686 147 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 ACSM5Q6NUN0 579 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 RBMS3Q6XE24 437 aaKnown RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 ZNF771Q7L3S4 317 aaPredicted RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 LINGO2Q7L985 606 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 ABHD12BQ7Z5M8 362 aaPredicted RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 PXKQ7Z7A4 578 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 ZDHHC21Q8IVQ6 265 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 WDFY1Q8IWB7 410 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 TEX29Q8N6K0 151 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 OR4M2Q8NGB6 313 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 OR6N1Q8NGY5 312 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 OR51A7Q8NH64 312 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 MOSPD2Q8NHP6 518 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 ACOT11Q8WXI4 607 aaPredicted RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 RDH5Q92781 318 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 SLC7A6OSQ96CW6 309 aaPredicted RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 SYT3Q9BQG1 590 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 BTBD10Q9BSF8 475 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 MRPL37Q9BZE1 423 aaKnown RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 C1orf21Q9H246 121 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 NTN4Q9HB63 628 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 CRLF2Q9HC73 371 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 INIPQ9NRY2 104 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 CRNNQ9UBG3 495 aaPredicted RBP8.73□□□□□ -1.01
GGA3-219ENST00000584550 FZR1Q9UM11 496 aa8.73□□□□□ -1.01
GGA3-219ENST00000584550 TRAV27A0A087WT01 109 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 IGHV2OR16-5A0A0B4J2B6 119 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 TRBV4-1A0A0J9YWV2 114 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 A0A1W2PRG6 482 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 MCIDASD6RGH6 385 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 M0R233 179 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 CDC14BO60729 498 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 SEC14L2O76054 403 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ZNF432O94892 652 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ALX3O95076 343 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 GADD45GO95257 159 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 SEMG1P04279 462 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 NAT2P11245 290 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ANPEPP15144 967 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 RRM2P31350 389 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 TMEM33P57088 247 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ARF1P84077 181 aaKnown RBP8.72□□□□□ -1.01
GGA3-219ENST00000584550 PRKCDQ05655 676 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 BNIP1Q12981 228 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 TOP3AQ13472 1001 aaPredicted RBP8.72□□□□□ -1.01
GGA3-219ENST00000584550 MAD2L1BPQ15013 274 aaPredicted RBP8.72□□□□□ -1.01
GGA3-219ENST00000584550 MSMPQ1L6U9 139 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 CEACAM16Q2WEN9 425 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ALKBH6Q3KRA9 238 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 DNAL1Q4LDG9 190 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 PHYHD1Q5SRE7 291 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 C1QTNF12Q5T7M4 302 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 DCAF12L2Q5VW00 463 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 NHLRC1Q6VVB1 395 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 MBOAT2Q6ZWT7 520 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 IGFN1Q86VF2 1251 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 C1QL4Q86Z23 238 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 RNF113BQ8IZP6 322 aaKnown RBP8.72□□□□□ -1.01
GGA3-219ENST00000584550 TMEM123Q8N131 208 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 OR13C2Q8NGS9 318 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 SLC7A13Q8TCU3 470 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ZNF837Q96EG3 531 aaPredicted RBP8.72□□□□□ -1.01
GGA3-219ENST00000584550 FAM46AQ96IP4 442 aaKnown RBP8.72□□□□□ -1.01
GGA3-219ENST00000584550 ULBP2Q9BZM5 246 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 LINC00470Q9BZP3 86 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 MUC13Q9H3R2 512 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ZNF665Q9H7R5 613 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 GPR35Q9HC97 309 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 B3GAT2Q9NPZ5 323 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 CMAHPQ9Y471 501 aa8.72□□□□□ -1.01
GGA3-219ENST00000584550 ARPC4-TTLL3A0A0A6YYG9 625 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 A0A1W2PRQ8 180 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 TCRBV5S2A0A599 114 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 ZNF503-AS2A6NEH8 195 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 DNAJC9-AS1A6NH13 148 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 SYNGR3O43761 229 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
GGA3-219ENST00000584550 IGF2P01344 180 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 IGKV3-15P01624 115 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 CBR1P16152 277 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 MDKP21741 143 aaPredicted RBP8.71□□□□□ -1.02
GGA3-219ENST00000584550 OMGP23515 440 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 PRTN3P24158 256 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 CAPZA2P47755 286 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 CSNK1A1P48729 337 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 ERFP50548 548 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 SMIM11AP58511 58 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 DGCR6Q14129 220 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 SEC23BQ15437 767 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 C3orf36Q3SXR2 165 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 FAM98BQ52LJ0 330 aaKnown RBP8.71□□□□□ -1.02
GGA3-219ENST00000584550 ALG10Q5BKT4 473 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 MTX3Q5HYI7 312 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 LCN8Q6JVE9 175 aa8.71□□□□□ -1.02
GGA3-219ENST00000584550 LEG1Q6P5S2 330 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms