RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ZNF670Q9BS34 389 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 ACAT2Q9BWD1 397 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 CDC42EP4Q9H3Q1 356 aaKnown RBP1.98□□□□□ -2.09
COPS3-217ENST00000583160 ROPN1Q9HAT0 212 aaPredicted RBP1.98□□□□□ -2.09
COPS3-217ENST00000583160 TMEM9BQ9NQ34 198 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 DMAC2Q9NW81 257 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 SMPD3Q9NY59 655 aaPredicted RBP1.98□□□□□ -2.09
COPS3-217ENST00000583160 STOML2Q9UJZ1 356 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 CDH9Q9ULB4 789 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 NDRG2Q9UN36 371 aaKnown RBP1.98□□□□□ -2.09
COPS3-217ENST00000583160 CCL26Q9Y258 94 aa1.98□□□□□ -2.09
COPS3-217ENST00000583160 APC2O95996 2303 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 PTPRQQ9UMZ3 2332 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 TMEM131Q92545 1883 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 GOLGA4Q13439 2230 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 ASXL3Q9C0F0 2248 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 ZNF233A6NK53 670 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 BET1O15155 118 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 ANGPTL7O43827 346 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 HUS1O60921 280 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 BCAS2O75934 225 aaPredicted RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 C6orf47O95873 294 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 RHOXF2BP0C7M4 288 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 CISD3P0C7P0 127 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 GABRG2P18507 467 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 HLA-DPA1P20036 260 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 PAICSP22234 425 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 CYP2F1P24903 491 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 IFNAR2P48551 515 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 ACOT2P49753 483 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 INCA1Q0VD86 236 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 SRSF5Q13243 272 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 SF3A2Q15428 464 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 NSUN5P1Q3KNT7 163 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 KRTAP13-2Q52LG2 175 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 BOLA3Q53S33 107 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 FRMPD2BQ6IN97 320 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 CCDC73Q6ZRK6 1079 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 GDPD3Q7L5L3 318 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 UNC93AQ86WB7 457 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 TMEM17Q86X19 198 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 CBWD2Q8IUF1 395 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 PCP2Q8IVA1 136 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 Q8N976 141 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 FAM184AQ8NB25 1140 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 PNPT1Q8TCS8 783 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 ST8SIA1Q92185 356 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 RAPGEF5Q92565 580 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 EDEM2Q9BV94 578 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 ROGDIQ9GZN7 287 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 LINC00597Q9H2U6 94 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 FBXO44Q9H4M3 255 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 ZSCAN16Q9H4T2 348 aaPredicted RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 TRAF3IP3Q9Y228 551 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 COQ4Q9Y3A0 265 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 YTHDF2Q9Y5A9 579 aaKnown RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 DOCK4Q8N1I0 1966 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 BPTFQ12830 3046 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 IGF2RP11717 2491 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 LAMA5O15230 3695 aa1.97□□□□□ -2.09
COPS3-217ENST00000583160 COL27A1Q8IZC6 1860 aaPredicted RBP1.97□□□□□ -2.09
COPS3-217ENST00000583160 PTPRJQ12913 1337 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 CEP295Q9C0D2 2601 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 IGKV1D-8A0A087WSZ0 117 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 IGHV1OR15-9A0A0B4J2B8 117 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 A0A0G2JLM5 398 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 CXorf51AA0A1B0GTR3 108 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 FAM230AA0A1W2PPH8 454 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 F8VP50 259 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SGK1O00141 431 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 COCHO43405 550 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 B4GALT2O60909 372 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 YEATS4O95619 227 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 ASS1P00966 412 aaKnown RBP1.96□□□□□ -2.1
COPS3-217ENST00000583160 APODP05090 189 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 BCKDHBP21953 392 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 GTF2H1P32780 548 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 RDXP35241 583 aaKnown RBP1.96□□□□□ -2.1
COPS3-217ENST00000583160 TDGF1P3P51864 188 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 ARPP19P56211 112 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 ZNF33AQ06730 810 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SPAG1Q07617 926 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 CYP24A1Q07973 514 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SNRNP35Q16560 246 aaKnown RBP1.96□□□□□ -2.1
COPS3-217ENST00000583160 LINC01620Q4KN68 170 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 TMEM255AQ5JRV8 349 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 C1orf220Q5T0J3 134 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 Q6ZR03 302 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 CLEC20AQ6ZU45 233 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 CSGALNACT2Q8N6G5 542 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 BCORP1Q8N888 145 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 LINC00301Q8NCQ3 95 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 TSTD1Q8NFU3 115 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 OR5B17Q8NGF7 314 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 NANPQ8TBE9 248 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SCFD1Q8WVM8 642 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SLC13A3Q8WWT9 602 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 MYLPFQ96A32 169 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SYAP1Q96A49 352 aaPredicted RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms