RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 C20orf141Q9NUB4 165 aa9□□□□□ -0.97
RFFL-209ENST00000581265 EIF3KQ9UBQ5 218 aaKnown RBP9□□□□□ -0.97
RFFL-209ENST00000581265 RIMS3Q9UJD0 308 aa9□□□□□ -0.97
RFFL-209ENST00000581265 SH3GLB1Q9Y371 365 aa9□□□□□ -0.97
RFFL-209ENST00000581265 TGP01266 2768 aa9□□□□□ -0.97
RFFL-209ENST00000581265 PPIAL4EA0A075B759 164 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 PPIAL4CA0A0B4J2A2 164 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 PLSCR5A0PG75 271 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 C5orf49A4QMS7 147 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 HTR3EA5X5Y0 456 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 PPIAL4DF5H284 164 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 OR5F1O95221 314 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 SLC2A10O95528 541 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 IGHV1-46P01743 117 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 PPIAL4FP0DN26 164 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 THRBP10828 461 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 NR2C1P13056 603 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 CCNOP22674 350 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 GCH1P30793 250 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 CDAP32320 146 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 GDI2P50395 445 aaKnown RBP8.99□□□□□ -0.97
RFFL-209ENST00000581265 PSG4Q00888 419 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 SLC3A1Q07837 685 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 PIN1Q13526 163 aaPredicted RBP8.99□□□□□ -0.97
RFFL-209ENST00000581265 CYLC2Q14093 348 aaPredicted RBP8.99□□□□□ -0.97
RFFL-209ENST00000581265 TAF11Q15544 211 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 SGCAQ16586 387 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 TMEM255AQ5JRV8 349 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 DCAF12L2Q5VW00 463 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 METTL21CQ5VZV1 264 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 NANOGP8Q6NSW7 305 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 SLC25A47Q6Q0C1 308 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 CALHM3Q86XJ0 350 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 ALDH16A1Q8IZ83 802 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 MOSPD2Q8NHP6 518 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 PFN4Q8NHR9 129 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 KLF14Q8TD94 323 aaPredicted RBP8.99□□□□□ -0.97
RFFL-209ENST00000581265 TMEM255BQ8WV15 326 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 TMEM239Q8WW34 195 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 HDAC2Q92769 488 aaKnown RBP8.99□□□□□ -0.97
RFFL-209ENST00000581265 SH3GL1Q99961 368 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 EGLN1Q9GZT9 426 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 TXNIPQ9H3M7 391 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 OPN4Q9UHM6 478 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 BAG5Q9UL15 447 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 ZDHHC8Q9ULC8 765 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 ARHGAP32A7KAX9 2087 aa8.99□□□□□ -0.97
RFFL-209ENST00000581265 IGKV1D-43A0A0B4J1Z2 117 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 GMNCA6NCL1 334 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 H3BSA7 217 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 SPRY3O43610 288 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 FSHBP01225 129 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 CD55P08174 381 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 ADRA2CP18825 462 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 MAKP20794 623 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 FPR2P25090 351 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 MPV17P39210 176 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 TAS2R41P59536 307 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 GLO1Q04760 184 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 FMODQ06828 376 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 TUSC1Q2TAM9 212 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 TREML1Q86YW5 311 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 ZDHHC22Q8N966 263 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 AKR7LQ8NHP1 331 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 SLC25A40Q8TBP6 338 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 FNDC8Q8TC99 324 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 DYDC1Q8WWB3 177 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 IPCEF1Q8WWN9 437 aaPredicted RBP8.98□□□□□ -0.97
RFFL-209ENST00000581265 RBP7Q96R05 134 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 DIRC2Q96SL1 478 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 GAL3ST1Q99999 423 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 OR2H1Q9GZK4 316 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 OR2J1Q9GZK6 312 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 ZNF696Q9H7X3 374 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 INTS9Q9NV88 658 aaKnown RBP8.98□□□□□ -0.97
RFFL-209ENST00000581265 CGGBP1Q9UFW8 167 aaPredicted RBP8.98□□□□□ -0.97
RFFL-209ENST00000581265 HIF3AQ9Y2N7 669 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 MED31Q9Y3C7 131 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 TIMM10BQ9Y5J6 103 aa8.98□□□□□ -0.97
RFFL-209ENST00000581265 ZSCAN5BA6NJL1 495 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 FBP2O00757 339 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 NGFP01138 241 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 NPPAP01160 153 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 IFNA14P01570 189 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 CST2P09228 141 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 TNFRSF1BP20333 461 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 LAP3P28838 519 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 PCBD1P61457 104 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 PPP1CBP62140 327 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 ERVK-25P63136 954 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 CD47Q08722 323 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 ALG10Q5BKT4 473 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 TTMPQ5BVD1 217 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 RABL3Q5HYI8 236 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 SPATA46Q5T0L3 261 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 FOXL2NBQ6ZUU3 175 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 BPIFB2Q8N4F0 458 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 OR8J3Q8NGG0 315 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 NSMAFQ92636 917 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms