RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GOLGA8JA6NMD2 632 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 GOLGA8KD6RF30 607 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 SAP18O00422 153 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 NDUFAB1O14561 156 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 LATO43561 262 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 SNAI2O43623 268 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 ENTPD5O75356 428 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 NUDT14O95848 222 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 UBCP0CG48 685 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 HOXA9P31269 272 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 PSMD4P55036 377 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 PSMC5P62195 406 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 HERVK_113P63132 956 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 ERVK-25P63136 954 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 DEFB103AP81534 67 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 C18orf21Q32NC0 220 aaPredicted RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 XKR4Q5GH76 650 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 MBOAT1Q6ZNC8 495 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 ABHD12BQ7Z5M8 362 aaPredicted RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 SNX20Q7Z614 316 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 SCD5Q86SK9 330 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 ACOT1Q86TX2 421 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 TGIF2LXQ8IUE1 241 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 CMTM8Q8IZV2 173 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 LRRC75AQ8NAA5 344 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 OR4D5Q8NGN0 318 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 WDR36Q8NI36 951 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 HTR3CQ8WXA8 447 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 CRYGNQ8WXF5 182 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 CIDECQ96AQ7 238 aaPredicted RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 PINX1Q96BK5 328 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 NDUFAF3Q9BU61 184 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 ERVK-6Q9BXR3 956 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 BEX2Q9BXY8 128 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 DRC3Q9H069 523 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 NRN1Q9NPD7 142 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 MRM2Q9UI43 246 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 WDR45Q9Y484 360 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 MTCH2Q9Y6C9 303 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 SPTBN5Q9NRC6 3674 aaKnown RBP3.29□□□□□ -1.88
NF1-220ENST00000581113 NRCAMQ92823 1304 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 VCANP13611 3396 aa3.29□□□□□ -1.88
NF1-220ENST00000581113 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SMCO2A6NFE2 343 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 FABP12A6NFH5 140 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 CCT8L1PA6NM43 557 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 CLDN5O00501 218 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 CYB561D2O14569 222 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 B4GALT5O43286 388 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 AIREO43918 545 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 EFNA2O43921 213 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SEMA3DO95025 777 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 GJB5O95377 273 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 ANP32DO95626 131 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 F10P00742 488 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 OAS1P00973 400 aaKnown RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 SERPIND1P05546 499 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 HIST1H2AGP0C0S8 130 aaPredicted RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 CT62P0C5K7 136 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SYT1P21579 422 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 STOMP27105 288 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 CEACAM3P40198 252 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 HLCSP50747 726 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 CSNK1G2P78368 415 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 LCN2P80188 198 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SP4Q02446 784 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SLAMF1Q13291 335 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 DGCR6Q14129 220 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SLC10A1Q14973 349 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 UBE2SQ16763 222 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 LY6G6FQ5SQ64 297 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 SEL1L2Q5TEA6 688 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 ADNP2Q6IQ32 1131 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 NIPA1Q7RTP0 329 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 MRPL21Q7Z2W9 205 aaKnown RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 STXBP6Q8NFX7 210 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 OR1F12Q8NHA8 337 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 PIH1D2Q8WWB5 315 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 ACOT11Q8WXI4 607 aaPredicted RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 TMEM37Q8WXS4 190 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 GTF2H4Q92759 462 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 HIST1H2ACQ93077 130 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 DUS3LQ96G46 650 aaKnown RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 B3GALT6Q96L58 329 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 CTRCQ99895 268 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 ANGPTL4Q9BY76 406 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 LRRN3Q9H3W5 708 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 NT5MQ9NPB1 228 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 ADAP2Q9NPF8 381 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 TIGARQ9NQ88 270 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 INPP5EQ9NRR6 644 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 ZNF490Q9ULM2 529 aaPredicted RBP3.28□□□□□ -1.88
NF1-220ENST00000581113 RPH3ALQ9UNE2 315 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 PSMD13Q9UNM6 376 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 TIMM10BQ9Y5J6 103 aa3.28□□□□□ -1.88
NF1-220ENST00000581113 UBIAD1Q9Y5Z9 338 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms