RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ZNF440Q8IYI8 595 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CLIP4Q8N3C7 705 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 ADPRHL1Q8NDY3 354 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 OR4K5Q8NGD3 323 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF420Q8TAQ5 688 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 LHX4Q969G2 390 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC41A3Q96GZ6 507 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 PLEKHA8Q96JA3 519 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 POM121L2Q96KW2 1035 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 WDFY2Q96P53 400 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 TRNT1Q96Q11 434 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 RHOXF2Q9BQY4 288 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 C1orf50Q9BV19 199 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 PPA2Q9H2U2 334 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 RNF121Q9H920 327 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 GCM1Q9NP62 436 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 A4GALTQ9NPC4 353 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF180Q9UJW8 692 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 GTF2A1LQ9UNN4 478 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 PPP1R3CQ9UQK1 317 aa6.31□□□□□ -1.4
SMARCE1-217ENST00000580654 A0A087WUJ7 227 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM114B3SHH9 223 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM233B4DJY2 109 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 PHYHO14832 338 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 ENSAO43768 121 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 PEX11AO75192 247 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 LYPLA1O75608 230 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 F13BP05160 661 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 DBIP07108 87 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 TNFRSF1AP19438 455 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 NCF2P19878 526 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 GCAP28676 217 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 PHBP35232 272 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 ETV4P43268 484 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 KIR2DS4P43632 304 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 CSNK1A1P48729 337 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 COPZ1P61923 177 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 HPCAP84074 193 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 HOXC5Q00444 222 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 EMX1Q04741 257 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 EGFEM1PQ0D2K5 195 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 RUNDC3AQ59EK9 446 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 MTX3Q5HYI7 312 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 PABPC1L2AQ5JQF8 200 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 ZYG11AQ6WRX3 759 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 TIFABQ6ZNK6 161 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 LRRC74BQ6ZQY2 392 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 SERPINA11Q86U17 422 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 SNX32Q86XE0 403 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 SCCPDHQ8NBX0 429 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 RBM15BQ8NDT2 890 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 OR2Z1Q8NG97 314 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 OR8B3Q8NGG8 313 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 OR4A15Q8NGL6 344 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 MUC7Q8TAX7 377 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 CHAC2Q8WUX2 184 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 C3orf30Q96M34 536 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 OR2V2Q96R30 315 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 OR8B2Q96RD0 313 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC19A3Q9BZV2 496 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 DPY30Q9C005 99 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 POFUT1Q9H488 388 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 MTHFD2LQ9H903 347 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 ZDHHC18Q9NUE0 388 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 GLTPQ9NZD2 209 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 CLN8Q9UBY8 286 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 IL19Q9UHD0 177 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 PRDM4Q9UKN5 801 aa6.3□□□□□ -1.4
SMARCE1-217ENST00000580654 IQCMA0A1B0GVH7 501 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 ANKRD61A6NGH8 418 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF726A6NNF4 738 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 LRRN3E7EW58 273 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 RNASET2O00584 256 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 OR2T1O43869 369 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 FCN3O75636 299 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 PTHP01270 115 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 BGLAPP02818 100 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 OPN1SWP03999 348 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 SNRPAP09012 282 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 NHLRC4P0CG21 123 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 VSIG10L2P0DP72 767 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 MYL2P10916 166 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 NQO1P15559 274 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 PRPS1L1P21108 318 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 STOMP27105 288 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 EPHA3P29320 983 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 HOXD3P31249 432 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 APLNRP35414 380 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 BIDP55957 195 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 DNAJB13P59910 316 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 PPP1CBP62140 327 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 PGS1Q32NB8 556 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC36A2Q495M3 483 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 CCDC92Q53HC0 331 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 ZMAT1Q5H9K5 638 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms